G90252


Basic Information

Item Value
gene id G90252
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 3355065 ~ 3355489 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU112536
ttttcctcaaaattctacaaacaataccccataatgacaacgtgaaagaagtttgtttgaaatctttgcaaatgtattaaaaataaaaaacaaaaaaagcacatgtacataaatattcacagcctttgccatgacactcaaaattgagctcaggtgcatcctgtttccactgatcatccttgagatgtttctacaacttgattggagtccacctgtggtaaattcagttgattggacatgatttggaaaggcactcacctgtctatataaggtcccacagttaacagtacatgacagagcacaaaccaagccatgaagtccaaggaattgtctgtagacctctgagacaggattgtatcgaggcacagatctggggaagggtacagaaacatttctgcagcattgaaggtcccaatgagcacagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112536 True 425 lncRNA 0.40 1 3355065 3355489

Neighbor

gene id symbol gene type direction distance location
AMCG00017425 NA coding downstream 267415 2841922 ~ 3087650 (-)
AMCG00017417 letm1 coding downstream 788788 2528915 ~ 2566277 (-)
AMCG00017414 NA coding downstream 927938 2076178 ~ 2427127 (-)
AMCG00017406 NA coding downstream 1322849 2023432 ~ 2032216 (-)
AMCG00017408 pank2,LOC107391889,LOC107103406,LOC101161204 coding downstream 1339503 2005759 ~ 2015562 (-)
AMCG00017430 ctnna2 coding upstream 74132 3429621 ~ 3487525 (-)
AMCG00017431 ctnna2,LOC102793143,LOC107706127,LOC103137875 coding upstream 174194 3529683 ~ 3539396 (-)
AMCG00017434 ctnna2,ctnna1,LOC107594905,LOC107750356 coding upstream 382324 3737813 ~ 3747843 (-)
AMCG00017432 ctnna2,LOC107552348,LOC103137937,LOC107706127 coding upstream 421005 3776494 ~ 3799472 (-)
AMCG00017437 NA coding upstream 551963 3907452 ~ 3908488 (-)
G90244 NA non-coding downstream 414922 2939935 ~ 2940143 (-)
G90243 NA non-coding downstream 415588 2939250 ~ 2939477 (-)
G90226 NA non-coding downstream 518267 2836519 ~ 2836798 (-)
G90221 suclg1,LOC107746879 non-coding downstream 632767 2721426 ~ 2722298 (-)
G90157 NA non-coding downstream 890806 2373110 ~ 2464259 (-)
G90255 LOC100846954 non-coding upstream 48997 3404486 ~ 3404766 (-)
G90281 NA non-coding upstream 316806 3672295 ~ 3685214 (-)
G90287 NA non-coding upstream 599399 3954888 ~ 3955136 (-)
G90289 NA non-coding upstream 686198 4041687 ~ 4041894 (-)
G90307 NA non-coding upstream 847118 4202607 ~ 4202807 (-)
AMCG00017426 NA other downstream 513171 2711302 ~ 2841894 (-)
AMCG00017418 NA other downstream 739503 2601783 ~ 2615562 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 3003279 160054 ~ 351786 (-)
G89804 NA other downstream 3249180 105685 ~ 105885 (-)
G90400 NA other upstream 1187286 4542775 ~ 4544760 (-)
G90501 NA other upstream 1802895 5158384 ~ 5221021 (-)
G90502 NA other upstream 1866984 5222473 ~ 5223047 (-)
G90715 fat4,LOC106611628,LOC106604622 other upstream 3031763 6387252 ~ 6389038 (-)
G90746 NA other upstream 3377746 6733235 ~ 7188648 (-)

Expression


Co-expression Network