Gene
RNA
| Item | Value |
|---|---|
| gene id | G90281 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 3672295 ~ 3685214 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU112567 | True | 279 | lncRNA | 0.45 | 2 | 3672295 | 3685214 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017431 | ctnna2,LOC102793143,LOC107706127,LOC103137875 | coding | downstream | 132899 | 3529683 ~ 3539396 (-) |
| AMCG00017430 | ctnna2 | coding | downstream | 184770 | 3429621 ~ 3487525 (-) |
| AMCG00017425 | NA | coding | downstream | 584645 | 2841922 ~ 3087650 (-) |
| AMCG00017417 | letm1 | coding | downstream | 1106018 | 2528915 ~ 2566277 (-) |
| AMCG00017414 | NA | coding | downstream | 1245168 | 2076178 ~ 2427127 (-) |
| AMCG00017434 | ctnna2,ctnna1,LOC107594905,LOC107750356 | coding | upstream | 52599 | 3737813 ~ 3747843 (-) |
| AMCG00017432 | ctnna2,LOC107552348,LOC103137937,LOC107706127 | coding | upstream | 91280 | 3776494 ~ 3799472 (-) |
| AMCG00017437 | NA | coding | upstream | 222238 | 3907452 ~ 3908488 (-) |
| AMCG00017438 | NA | coding | upstream | 223299 | 3908513 ~ 3909212 (-) |
| AMCG00017436 | NA | coding | upstream | 518472 | 4203686 ~ 4204261 (-) |
| G90255 | LOC100846954 | non-coding | downstream | 267529 | 3404486 ~ 3404766 (-) |
| G90252 | NA | non-coding | downstream | 316806 | 3355065 ~ 3355489 (-) |
| G90244 | NA | non-coding | downstream | 732152 | 2939935 ~ 2940143 (-) |
| G90243 | NA | non-coding | downstream | 732818 | 2939250 ~ 2939477 (-) |
| G90226 | NA | non-coding | downstream | 835497 | 2836519 ~ 2836798 (-) |
| G90287 | NA | non-coding | upstream | 269674 | 3954888 ~ 3955136 (-) |
| G90289 | NA | non-coding | upstream | 356473 | 4041687 ~ 4041894 (-) |
| G90307 | NA | non-coding | upstream | 517393 | 4202607 ~ 4202807 (-) |
| G90354 | NA | non-coding | upstream | 661772 | 4346986 ~ 4347291 (-) |
| G90355 | NA | non-coding | upstream | 662880 | 4348094 ~ 4348312 (-) |
| AMCG00017426 | NA | other | downstream | 830401 | 2711302 ~ 2841894 (-) |
| AMCG00017418 | NA | other | downstream | 1056733 | 2601783 ~ 2615562 (-) |
| AMCG00017384 | LOC106911887,LOC104963986 | other | downstream | 3320509 | 160054 ~ 351786 (-) |
| G89804 | NA | other | downstream | 3566410 | 105685 ~ 105885 (-) |
| G90400 | NA | other | upstream | 857561 | 4542775 ~ 4544760 (-) |
| G90501 | NA | other | upstream | 1473170 | 5158384 ~ 5221021 (-) |
| G90502 | NA | other | upstream | 1537259 | 5222473 ~ 5223047 (-) |
| G90715 | fat4,LOC106611628,LOC106604622 | other | upstream | 2702038 | 6387252 ~ 6389038 (-) |
| G90746 | NA | other | upstream | 3048021 | 6733235 ~ 7188648 (-) |
