Gene
RNA
| Item | Value |
|---|---|
| gene id | G90337 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 4330370 ~ 4330583 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0003997 | acyl-CoA oxidase activity | molecular_function |
| GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU112625 | True | 214 | lncRNA | 0.32 | 1 | 4330370 | 4330583 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017429 | NA | coding | upstream | 130916 | 4189248 ~ 4199454 (+) |
| AMCG00017428 | lrrtm1,LOC107706126,LOC107551676,LOC107689474,LOC107558618,LOC107711523 | coding | upstream | 761650 | 3567260 ~ 3568720 (+) |
| AMCG00017427 | NA | coding | upstream | 848648 | 3275663 ~ 3481722 (+) |
| AMCG00017423 | suclg1,LOC107674246,LOC106602756 | coding | upstream | 1603543 | 2713157 ~ 2726827 (+) |
| AMCG00017420 | NA | coding | upstream | 1617897 | 2709071 ~ 2712473 (+) |
| AMCG00017439 | rnf24,LOC107689472 | coding | downstream | 52749 | 4383332 ~ 4384747 (+) |
| AMCG00017449 | NA | coding | downstream | 297632 | 4628215 ~ 4633610 (+) |
| AMCG00017450 | NA | coding | downstream | 359295 | 4689878 ~ 4691955 (+) |
| AMCG00017451 | NA | coding | downstream | 530791 | 4861374 ~ 4868470 (+) |
| AMCG00017454 | NA | coding | downstream | 554378 | 4884961 ~ 4900663 (+) |
| G90333 | NA | non-coding | upstream | 17895 | 4312258 ~ 4312475 (+) |
| G90284 | NA | non-coding | upstream | 432245 | 3897818 ~ 3898125 (+) |
| G90248 | NA | non-coding | upstream | 1092644 | 3237445 ~ 3237726 (+) |
| G90149 | NA | non-coding | upstream | 1801569 | 2491907 ~ 2528801 (+) |
| G90144 | NA | non-coding | upstream | 1826206 | 2461882 ~ 2504164 (+) |
| G90338 | NA | non-coding | downstream | 54658 | 4385241 ~ 4390541 (+) |
| G90413 | NA | non-coding | downstream | 367355 | 4697938 ~ 4710074 (+) |
| G90436 | NA | non-coding | downstream | 570439 | 4901022 ~ 4910792 (+) |
| G90475 | LOC104962440 | non-coding | downstream | 758010 | 5088593 ~ 5098887 (+) |
| G90477 | NA | non-coding | downstream | 761085 | 5091668 ~ 5222752 (+) |
| AMCG00017422 | leprotl1,LOC103152176 | other | upstream | 1634917 | 2687420 ~ 2695453 (+) |
| AMCG00017388 | LOC108267694,LOC106608525 | other | upstream | 4118434 | 207586 ~ 211936 (+) |
| AMCG00017386 | dctn1,LOC101464740 | other | upstream | 4231973 | 48007 ~ 98397 (+) |
| AMCG00017445 | NA | other | downstream | 262219 | 4592802 ~ 4606571 (+) |
| AMCG00017446 | NA | other | downstream | 332042 | 4662625 ~ 4688223 (+) |
| AMCG00017486 | NA | other | downstream | 2399155 | 6729738 ~ 7188643 (+) |
| G90877 | NA | other | downstream | 3337600 | 7668183 ~ 7671850 (+) |
| G90881 | NA | other | downstream | 3362002 | 7692585 ~ 7693347 (+) |
