G90502


Basic Information

Item Value
gene id G90502
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 5222473 ~ 5223047 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU112836
GCCCTTCATGGCAACACAATCCACAACAATAATTACTTTTATCACCCTCTTCATCTGGGCTCTCGCCATCTGCACTCAGGAATCCAGTGGACAGTATACTTTGACTCGGACTCCATCAGTGAAATCTGTTAACCGAGGAGAGACAGTCACTGTGAACTGTAAAGTCAGCAGTCCAGTGTACAGTGATTCTAATGGACAGTGGCTAAACTGGTACCAACAGAAACCTGGAGAAGCTCCTAAACTCCTGATCTATGCTGCCACTAACCGTGAGTCTGGGATCCCAGAGCGATTCAGTGGCAGTGGATCTGGGACTGACTTCACTCTGACCAGTCAGTGGAGTCCAGCCTGAAGATACAGGAGATTACTACTGTCAGAGTT

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production
ko05323 Rheumatoid arthritis

RNA

RNA id representative length rna type GC content exon number start site end site
TU112836 True 378 TUCP 0.48 2 5222473 5223047

Neighbor

gene id symbol gene type direction distance location
AMCG00017459 NA coding downstream 12656 5208933 ~ 5209817 (-)
AMCG00017458 NA coding downstream 155161 5052292 ~ 5067312 (-)
AMCG00017460 NA coding downstream 212371 4970408 ~ 5010102 (-)
AMCG00017455 mxd4,LOC107757594,LOC107700283 coding downstream 308394 4906814 ~ 4914079 (-)
AMCG00017452 NA coding downstream 338124 4876511 ~ 4884349 (-)
AMCG00017466 NA coding upstream 181797 5404844 ~ 5425674 (-)
AMCG00017467 NA coding upstream 238018 5461065 ~ 5465561 (-)
AMCG00017468 bbs7 coding upstream 244013 5467060 ~ 5484458 (-)
AMCG00017469 trpc3,trpc7,LOC107678610,LOC107757418,LOC108435597 coding upstream 268389 5491436 ~ 5520155 (-)
AMCG00017473 cetn1,LOC106604590 coding upstream 541523 5764570 ~ 5767143 (-)
G90443 NA non-coding downstream 285307 4929386 ~ 4937166 (-)
G90411 NA non-coding downstream 557306 4662836 ~ 4665167 (-)
G90345 NA non-coding downstream 831983 4384583 ~ 4390490 (-)
G90355 NA non-coding downstream 874161 4348094 ~ 4348312 (-)
G90354 NA non-coding downstream 875182 4346986 ~ 4347291 (-)
G90520 NA non-coding upstream 33042 5256089 ~ 5256406 (-)
G90540 NA non-coding upstream 132215 5355262 ~ 5356316 (-)
G90648 NA non-coding upstream 453852 5676899 ~ 5677249 (-)
G90670 NA non-coding upstream 556833 5779880 ~ 5780526 (-)
G90716 fat4,LOC104953884 non-coding upstream 1167838 6390885 ~ 6391229 (-)
G90501 NA other downstream 1452 5158384 ~ 5221021 (-)
G90400 NA other downstream 677713 4542775 ~ 4544760 (-)
AMCG00017426 NA other downstream 2380579 2711302 ~ 2841894 (-)
AMCG00017418 NA other downstream 2606911 2601783 ~ 2615562 (-)
AMCG00017384 LOC106911887,LOC104963986 other downstream 4870687 160054 ~ 351786 (-)
G90715 fat4,LOC106611628,LOC106604622 other upstream 1164205 6387252 ~ 6389038 (-)
G90746 NA other upstream 1510188 6733235 ~ 7188648 (-)
G90749 NA other upstream 1889389 7112436 ~ 7113181 (-)
AMCG00017497 NA other upstream 2444977 7668024 ~ 7679350 (-)
G90937 NA other upstream 2607838 7830885 ~ 7832592 (-)

Expression


Co-expression Network