Gene
RNA
| Item | Value |
|---|---|
| gene id | G90540 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 5355262 ~ 5356316 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0001917 | photoreceptor inner segment | cellular_component |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU112880 | True | 249 | lncRNA | 0.39 | 2 | 5355262 | 5356316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017459 | NA | coding | downstream | 145445 | 5208933 ~ 5209817 (-) |
| AMCG00017458 | NA | coding | downstream | 287950 | 5052292 ~ 5067312 (-) |
| AMCG00017460 | NA | coding | downstream | 345160 | 4970408 ~ 5010102 (-) |
| AMCG00017455 | mxd4,LOC107757594,LOC107700283 | coding | downstream | 441183 | 4906814 ~ 4914079 (-) |
| AMCG00017452 | NA | coding | downstream | 470913 | 4876511 ~ 4884349 (-) |
| AMCG00017466 | NA | coding | upstream | 48528 | 5404844 ~ 5425674 (-) |
| AMCG00017467 | NA | coding | upstream | 104749 | 5461065 ~ 5465561 (-) |
| AMCG00017468 | bbs7 | coding | upstream | 110744 | 5467060 ~ 5484458 (-) |
| AMCG00017469 | trpc3,trpc7,LOC107678610,LOC107757418,LOC108435597 | coding | upstream | 135120 | 5491436 ~ 5520155 (-) |
| AMCG00017473 | cetn1,LOC106604590 | coding | upstream | 408254 | 5764570 ~ 5767143 (-) |
| G90520 | NA | non-coding | downstream | 98856 | 5256089 ~ 5256406 (-) |
| G90443 | NA | non-coding | downstream | 418096 | 4929386 ~ 4937166 (-) |
| G90411 | NA | non-coding | downstream | 690095 | 4662836 ~ 4665167 (-) |
| G90345 | NA | non-coding | downstream | 964772 | 4384583 ~ 4390490 (-) |
| G90355 | NA | non-coding | downstream | 1006950 | 4348094 ~ 4348312 (-) |
| G90648 | NA | non-coding | upstream | 320583 | 5676899 ~ 5677249 (-) |
| G90670 | NA | non-coding | upstream | 423564 | 5779880 ~ 5780526 (-) |
| G90716 | fat4,LOC104953884 | non-coding | upstream | 1034569 | 6390885 ~ 6391229 (-) |
| G90717 | NA | non-coding | upstream | 1039332 | 6395648 ~ 6395865 (-) |
| G90718 | NA | non-coding | upstream | 1040312 | 6396628 ~ 6396891 (-) |
| G90502 | NA | other | downstream | 132215 | 5222473 ~ 5223047 (-) |
| G90501 | NA | other | downstream | 134241 | 5158384 ~ 5221021 (-) |
| G90400 | NA | other | downstream | 810502 | 4542775 ~ 4544760 (-) |
| AMCG00017426 | NA | other | downstream | 2513368 | 2711302 ~ 2841894 (-) |
| AMCG00017418 | NA | other | downstream | 2739700 | 2601783 ~ 2615562 (-) |
| G90715 | fat4,LOC106611628,LOC106604622 | other | upstream | 1030936 | 6387252 ~ 6389038 (-) |
| G90746 | NA | other | upstream | 1376919 | 6733235 ~ 7188648 (-) |
| G90749 | NA | other | upstream | 1756120 | 7112436 ~ 7113181 (-) |
| AMCG00017497 | NA | other | upstream | 2311708 | 7668024 ~ 7679350 (-) |
| G90937 | NA | other | upstream | 2474569 | 7830885 ~ 7832592 (-) |
