G90647


Basic Information

Item Value
gene id G90647
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 5676901 ~ 5677244 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113030
caaggatgtctctgtacattgctgcattcatctttccctcgatcctgactagtctcccagttcctgccgctgaaaaacatccccacagcatgatgctgccaccaccatgcttcactgtagggatggtattggccaggtgatgagcggtgcctggtttcctccagacatgagttcaatctttgtttcatcagaccagagaattttgtttctcatggtctgagagtccttcaggtgccttttggtaaactccaggcgggctgtcatgtgccttttactgaggagtggcttccgtctggccactctaccatacaggcctgattggtggagtgctgcagagatggttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113030 True 344 lncRNA 0.51 1 5676901 5677244

Neighbor

gene id symbol gene type direction distance location
AMCG00017471 NA coding upstream 36659 5625024 ~ 5640242 (+)
AMCG00017470 kiaa1109 coding upstream 52747 5538512 ~ 5624154 (+)
AMCG00017461 exosc9,LOC107746036,LOC101063486 coding upstream 217199 5425431 ~ 5459702 (+)
AMCG00017465 NA coding upstream 297753 5378459 ~ 5379148 (+)
AMCG00017462 NA coding upstream 301447 5373357 ~ 5375454 (+)
AMCG00017474 fgf2,LOC106604591,LOC102794353 coding downstream 102636 5779880 ~ 5792505 (+)
AMCG00017475 NA coding downstream 131584 5808828 ~ 5816998 (+)
AMCG00017480 NA coding downstream 273592 5950836 ~ 5951792 (+)
AMCG00017477 fat4 coding downstream 635538 6312782 ~ 6317887 (+)
AMCG00017479 fat4,LOC106604622,LOC102795788 coding downstream 684115 6361359 ~ 6370652 (+)
G90561 NA non-coding upstream 213837 5440212 ~ 5463064 (+)
G90552 NA non-coding upstream 264212 5407648 ~ 5412689 (+)
G90554 NA non-coding upstream 264640 5411731 ~ 5412261 (+)
G90551 NA non-coding upstream 269372 5405442 ~ 5407529 (+)
G90477 NA non-coding upstream 454149 5091668 ~ 5222752 (+)
G90691 NA non-coding downstream 300920 5978164 ~ 5978368 (+)
G90703 NA non-coding downstream 605913 6283157 ~ 6283441 (+)
G90709 NA non-coding downstream 724490 6401734 ~ 6402188 (+)
G90731 NA non-coding downstream 1050788 6728032 ~ 6763072 (+)
G90737 NA non-coding downstream 1197723 6874967 ~ 6892610 (+)
AMCG00017446 NA other upstream 988678 4662625 ~ 4688223 (+)
AMCG00017445 NA other upstream 1070330 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 2981448 2687420 ~ 2695453 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 5464965 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 5578504 48007 ~ 98397 (+)
AMCG00017486 NA other downstream 1052494 6729738 ~ 7188643 (+)
G90877 NA other downstream 1990939 7668183 ~ 7671850 (+)
G90881 NA other downstream 2015341 7692585 ~ 7693347 (+)
AMCG00017508 NA other downstream 2129134 7806378 ~ 7813639 (+)
G90955 NA other downstream 2455124 8132368 ~ 8132854 (+)

Expression


Co-expression Network