Gene
RNA
| Item | Value |
|---|---|
| gene id | G90718 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 6396628 ~ 6396891 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU113107 | True | 264 | lncRNA | 0.47 | 1 | 6396628 | 6396891 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017476 | ankrd50 | coding | downstream | 185626 | 6181726 ~ 6211002 (-) |
| AMCG00017472 | NA | coding | downstream | 588137 | 5790848 ~ 5808491 (-) |
| AMCG00017473 | cetn1,LOC106604590 | coding | downstream | 629485 | 5764570 ~ 5767143 (-) |
| AMCG00017469 | trpc3,trpc7,LOC107678610,LOC107757418,LOC108435597 | coding | downstream | 876473 | 5491436 ~ 5520155 (-) |
| AMCG00017468 | bbs7 | coding | downstream | 912170 | 5467060 ~ 5484458 (-) |
| AMCG00017482 | NA | coding | upstream | 321545 | 6718436 ~ 6721393 (-) |
| AMCG00017481 | NA | coding | upstream | 375931 | 6772822 ~ 6773798 (-) |
| AMCG00017485 | NA | coding | upstream | 580046 | 6976937 ~ 6981260 (-) |
| AMCG00017487 | rpia,LOC107568642,LOC107695020,LOC107671341,LOC102776079 | coding | upstream | 813467 | 7210358 ~ 7221745 (-) |
| AMCG00017489 | NA | coding | upstream | 895965 | 7292856 ~ 7299945 (-) |
| G90717 | NA | non-coding | downstream | 763 | 6395648 ~ 6395865 (-) |
| G90716 | fat4,LOC104953884 | non-coding | downstream | 5399 | 6390885 ~ 6391229 (-) |
| G90670 | NA | non-coding | downstream | 616102 | 5779880 ~ 5780526 (-) |
| G90648 | NA | non-coding | downstream | 719379 | 5676899 ~ 5677249 (-) |
| G90540 | NA | non-coding | downstream | 1040312 | 5355262 ~ 5356316 (-) |
| G90724 | LOC103376870 | non-coding | upstream | 296842 | 6693733 ~ 6694106 (-) |
| G90751 | NA | non-coding | upstream | 363764 | 6760655 ~ 6876968 (-) |
| G90759 | NA | non-coding | upstream | 486751 | 6883642 ~ 6883968 (-) |
| G90762 | NA | non-coding | upstream | 668994 | 7065885 ~ 7124174 (-) |
| G90783 | NA | non-coding | upstream | 808729 | 7205620 ~ 7205861 (-) |
| G90715 | fat4,LOC106611628,LOC106604622 | other | downstream | 7590 | 6387252 ~ 6389038 (-) |
| G90502 | NA | other | downstream | 1173581 | 5222473 ~ 5223047 (-) |
| G90501 | NA | other | downstream | 1175607 | 5158384 ~ 5221021 (-) |
| G90400 | NA | other | downstream | 1851868 | 4542775 ~ 4544760 (-) |
| AMCG00017426 | NA | other | downstream | 3554734 | 2711302 ~ 2841894 (-) |
| G90746 | NA | other | upstream | 336344 | 6733235 ~ 7188648 (-) |
| G90749 | NA | other | upstream | 715545 | 7112436 ~ 7113181 (-) |
| AMCG00017497 | NA | other | upstream | 1271133 | 7668024 ~ 7679350 (-) |
| G90937 | NA | other | upstream | 1433994 | 7830885 ~ 7832592 (-) |
| G90939 | LOC105903575 | other | upstream | 1595246 | 7992137 ~ 7996595 (-) |
