G90724 (LOC103376870)


Basic Information

Item Value
gene id G90724
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 6693733 ~ 6694106 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113113
tcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaactaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatagttgttggtgccagacgggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggtgtgaaaagggaaaaacatccagtatgcggcagtcctgtgggcgaaaatgccctgttgatgctagaggtcagaggagaatgggccgactga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113113 True 374 lncRNA 0.44 1 6693733 6694106

Neighbor

gene id symbol gene type direction distance location
AMCG00017476 ankrd50 coding downstream 482731 6181726 ~ 6211002 (-)
AMCG00017472 NA coding downstream 885242 5790848 ~ 5808491 (-)
AMCG00017473 cetn1,LOC106604590 coding downstream 926590 5764570 ~ 5767143 (-)
AMCG00017469 trpc3,trpc7,LOC107678610,LOC107757418,LOC108435597 coding downstream 1173578 5491436 ~ 5520155 (-)
AMCG00017468 bbs7 coding downstream 1209275 5467060 ~ 5484458 (-)
AMCG00017482 NA coding upstream 24330 6718436 ~ 6721393 (-)
AMCG00017481 NA coding upstream 78716 6772822 ~ 6773798 (-)
AMCG00017485 NA coding upstream 282831 6976937 ~ 6981260 (-)
AMCG00017487 rpia,LOC107568642,LOC107695020,LOC107671341,LOC102776079 coding upstream 516252 7210358 ~ 7221745 (-)
AMCG00017489 NA coding upstream 598750 7292856 ~ 7299945 (-)
G90718 NA non-coding downstream 296842 6396628 ~ 6396891 (-)
G90717 NA non-coding downstream 297868 6395648 ~ 6395865 (-)
G90716 fat4,LOC104953884 non-coding downstream 302504 6390885 ~ 6391229 (-)
G90670 NA non-coding downstream 913207 5779880 ~ 5780526 (-)
G90648 NA non-coding downstream 1016484 5676899 ~ 5677249 (-)
G90751 NA non-coding upstream 66549 6760655 ~ 6876968 (-)
G90759 NA non-coding upstream 189536 6883642 ~ 6883968 (-)
G90762 NA non-coding upstream 371779 7065885 ~ 7124174 (-)
G90783 NA non-coding upstream 511514 7205620 ~ 7205861 (-)
G90796 NA non-coding upstream 527722 7221828 ~ 7226843 (-)
G90715 fat4,LOC106611628,LOC106604622 other downstream 304695 6387252 ~ 6389038 (-)
G90502 NA other downstream 1470686 5222473 ~ 5223047 (-)
G90501 NA other downstream 1472712 5158384 ~ 5221021 (-)
G90400 NA other downstream 2148973 4542775 ~ 4544760 (-)
AMCG00017426 NA other downstream 3851839 2711302 ~ 2841894 (-)
G90746 NA other upstream 39129 6733235 ~ 7188648 (-)
G90749 NA other upstream 418330 7112436 ~ 7113181 (-)
AMCG00017497 NA other upstream 973918 7668024 ~ 7679350 (-)
G90937 NA other upstream 1136779 7830885 ~ 7832592 (-)
G90939 LOC105903575 other upstream 1298031 7992137 ~ 7996595 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G200065 NA non-coding CI01000047 null 2428898 ~ 2429659 (+)