G90796


Basic Information

Item Value
gene id G90796
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7221828 ~ 7226843 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113285
GTTTGTGCAGGGGAAAATGCAAACTATACGGTCCCTACACATTCTAGCATCAGAGTTTATAAAAGAGTTGATGATCTTCTGATTTGCTACTTGCTTCCTGGGGACAATGTCCATTGTGAAGATGGTTATGCGCTGAACAACACTTCCTTTGTGATCAAGGCCGTAAACAAGCTTCATAATGGCATATATGACACTGAACTTGATGACAGATCCATAACACTCCATCTTGAAGTTACTAATTGTTCAGTATCAACCAGAGAAAAGCCTGAAAACAAAGGTCATATAAATGAGAATGGAGTTGCTGCCCTGGGTCCTTCTGCTTTGCCTCGGCTCCTGGCTGCTGTGCTGGTACTGCGGACTGCTGGGTATCTGTAGACAGGGTTGGCACATTGTCTGGGGTGAAGTGTCACAGTGTCTGCGTGAAGAATCGTCACAAGAGAAGACTGCAGCCTCCTTTTTGCTTAATGCGTTTTTCTCATTACTAATCTCGACTTGGTCCCTCATTAGTTTTATAGTCAATGTGTGATGTGGGGTACAATGTTAAACAGCCTTAATGAAgtatattgttaaataattagGGTAACTAGCCTGTGAATAGTTCTGCCGAGGACAGTGGATATGGGAGTGAAGAAGGGGGTGGGCATGTGATGACACAGTGTATCTCTCACTCTTTCCCCAGCTGTGGCAGGTGAGGGATGCTGACAGACAGAGTCTTTACGATCTCTACATTCTCTGTTGTTacagacacagcacacagtTTTAATCAGAATAAGTCGTGGTTGTGGAAGCCACACTTAAAGCTCGCCGACTCTCCTGAGTctgaatttcattttcatcactCTGTAAATTGACACAATCACAGATCTAATTCTGCTGGGTTTTAGATCCTATTCTGACACAGATTAAAGAAGTGCCATGGGCATAGACTACATGGCCAAaggtatgtggacaccccttctaattagtgaaTTCGTCtctttcagccacacccattgctgacaggtgtattaaatcaagcacacagccgtgcaatctccatagacaaacattggcattAGAATGGGCCCCACtaaagagctcagtgactttcaattttgtgccctgctagagctgccccggtCAACTAAAGGTCTGtaattgtgaagtggaaacggCTGgtagcaacaacagctcagctgcAAAGTGGTAATCCACACAAGCTCGGAGAATGGGACCACCGAGTGCTGAAGCCTACAAATCATCTGTCCTCAGCTGTAACAATAATTTCTGGgctccaaactgcctctggaagcagtTTTGTTGAGATCGGTGTAGAAGAagttgactggcctgcacagagccctgacctcaaccccatcccacctttgggatgaactggaacgcCGACTGTGACCCAGGGCTggtcgcccaacatcagtgcccgacctcactaatgctcttgtggctgaatggaagcaaatccccgcagcaatgttccaacatctagtggaaaaccttcccagaagagtggaggctgttatagcagcaaagaggcgaccaactccatattaatgcccctGATTTTGGAATGAGGTGTTCgatgagcaggtgtccacacTTTTGGCCAAGTAGTGTGTAACTGATGAAACTTTGTATTGTATACataagcaaacacacacatatatatgcatctagaataaaatatacactggCTGTCACAATGACGGGATTAAATCGACAATATTACTCAAGTACAAAGTGCAAAAgatgtgtgtgttaaaaaaagggTGGCCCTTTTTAGCTCTCACAGCTGCACAATAGGGATTACATCACAGAAGTGTTATAGCAGTGTGACTGTTGTTCTTCATTCAGTCAGATTGTCAATTTTGTCCCATTTGGTTTCAAACCAGTATAtctttattatactttattgactttaaataattaattcatttataatgtttaagTAACAGAAAACTATACAAAAGTGATGGTAGTACACTGGGATTTGGGATTTTCCCGGTTAAACATCTCAACAGACTGCTTGGCtgcttcatcatcatcataataataataataataataataataataataataatataaggcGAGACATATCTGGGAGACCGTTAAACTACCACCTATCAACTATCTCTTGTTCATCAGGTCTACCCGGTgaattttttaattcaaattgtcTTTATCAACACTAAGTGCAATGACTCCTGGACTCTGGGCAGCATGGTTGTGACCTCAGCCTGCCACTGGCTAGCCCTTCTGTATCTATCTGCACTGCTTGCACGGGTGTAGATAAACATAAGATAATCTTTTGTGCAGTGTATGCATAAGAGGTGAGAACACTGTGGTGTTGCGCAGCACTATATTACACCGTTAGACCTTCCCTCTGAATCACACCCATCTCCAGCACTATGACCTCTGACTTTGAGGAGAAACAGGCTGCTGCAATATTGCCTACACATCAAAAAAGGGGCCTCAGTTTCTGAGCTTTAAACCACAAGAAGAAATGTTGCCTACACCCATGAGCTTAAAAGCAGGCCGAAGCCATTTTAGAGTACATCGGACTCTGAACCATTCTGGGTCTACGAGCTGGTCATCTGTACAGGCAGTCAGAGCCTGACTAGACTTGTCTATGTGTTATTTACAAGCAGTGTAGCTCTGTGGTATCCAACCATCTGATCTGTCTGCTTTGCTTgcttaaactaaaataaactaagaTTATCTTGATATAAAAAGAGGTCCACACCTGTTCTTGCCTCATCAATGTGGAAGCAAAGTGGCatcctttctctttttattatcatatagtgtgtatttttattttaacctgtAATAAAGTCTTCTCCGGCACTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113285 True 2852 lncRNA 0.43 5 7221828 7226843

Neighbor

gene id symbol gene type direction distance location
AMCG00017487 rpia,LOC107568642,LOC107695020,LOC107671341,LOC102776079 coding downstream 83 7210358 ~ 7221745 (-)
AMCG00017485 NA coding downstream 240568 6976937 ~ 6981260 (-)
AMCG00017481 NA coding downstream 448030 6772822 ~ 6773798 (-)
AMCG00017482 NA coding downstream 500435 6718436 ~ 6721393 (-)
AMCG00017476 ankrd50 coding downstream 1010826 6181726 ~ 6211002 (-)
AMCG00017489 NA coding upstream 66013 7292856 ~ 7299945 (-)
AMCG00017490 NA coding upstream 224799 7451642 ~ 7453573 (-)
AMCG00017492 NA coding upstream 262239 7489082 ~ 7491787 (-)
AMCG00017499 NA coding upstream 361108 7587951 ~ 7594082 (-)
AMCG00017500 gba2,LOC104958191,LOC104958190 coding upstream 398728 7625571 ~ 7639260 (-)
G90783 NA non-coding downstream 15967 7205620 ~ 7205861 (-)
G90762 NA non-coding downstream 97654 7065885 ~ 7124174 (-)
G90759 NA non-coding downstream 337860 6883642 ~ 6883968 (-)
G90751 NA non-coding downstream 344860 6760655 ~ 6876968 (-)
G90724 LOC103376870 non-coding downstream 527722 6693733 ~ 6694106 (-)
G90805 NA non-coding upstream 39224 7266067 ~ 7282477 (-)
G90817 NA non-coding upstream 96887 7323730 ~ 7324107 (-)
G90885 NA non-coding upstream 466740 7693583 ~ 7694005 (-)
G90908 NA non-coding upstream 546375 7773218 ~ 7784195 (-)
G90938 NA non-coding upstream 601655 7828498 ~ 7830609 (-)
G90746 NA other downstream 33180 6733235 ~ 7188648 (-)
G90749 NA other downstream 108647 7112436 ~ 7113181 (-)
G90715 fat4,LOC106611628,LOC106604622 other downstream 832790 6387252 ~ 6389038 (-)
G90502 NA other downstream 1998781 5222473 ~ 5223047 (-)
G90501 NA other downstream 2000807 5158384 ~ 5221021 (-)
AMCG00017497 NA other upstream 441181 7668024 ~ 7679350 (-)
G90937 NA other upstream 604042 7830885 ~ 7832592 (-)
G90939 LOC105903575 other upstream 765294 7992137 ~ 7996595 (-)
AMCG00017520 NA other upstream 1246647 8473490 ~ 8514955 (-)
AMCG00017531 NA other upstream 1505917 8732760 ~ 8748743 (-)

Expression


Co-expression Network