G90805


Basic Information

Item Value
gene id G90805
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7266067 ~ 7282477 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113297
TATACAAATGTCatagaatgttttattaaatttagaCTTGTAAGAAGTCGCGATATTTCAATGCACCTGACAATTATTGCATTAAGTGCATTCTCTCATACCACCAACCCAAAACGGATTGATTTagcaataaacataaataaaaacaaaaatacatatttacatttgcaacagacaaaaacagatTGTGCTTACAGAGACAAACTAGTTTACAAGATTGGCAGGTCCACTGCGGCTGTGGTGCGATACCTGACACAACCAGTCTAAAATCCAAGATTGCTACAGTGCCAAGTGCCAGTCATGAACCGAGGAGaattaacattttgaattaaaattggaacaaatggaaaacaagagctcgatttttctctttttttggaCTCGTAGTAAAATTCAGATATGCaccttttaattattcttcatAAGTgcaaagtgattaaaaaaaaaaaaaaaaactggaaaatccTGATCGGTCCCAAAACAAAGCTTCTGGAAAGCCTAGCGATCAAGCATGTATTCAATAACCCCTTCAAATTCACATACtgaatacagaaacaaatacataaactgaTCTGGATGTGTGGAACCACCATCTATTCCTGATGGAAGGATGGTGAGTGTTTTGTCCTCAGCATGGGGATTCTAAACACATGGCAGAGGACAGCATTGCCAGGCTAAAGGCTGCTGGCACAGAACTGACAATAGGAATGTAAACCTCCAGCCCTGGGGGGCCACAAGCCACCTGCTGGTTTTCTTTCCACCTGAGCCAATTAGTGGATTAGGTCACTTCATAAGTCATACTTGACTCCCACCGCTCAAGGTTTTGGGAAGTGATCAAGGCCTAGTGCAAATAATTCAAACACAGGCATGAAACTTCTCTGCTGTGAAAAccaatgcaattttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttatacacagaCAGTAAAGATGTTCTCAATACAGAGAAGACCTCATGCTTGGAACAGTTTGCAAAAATATACTTGTGCCAAGTCATTGCAAGTGATTATCCAAAGAAAGAAGAGGAGGTTTGTAACTTAAGTTTGAAGTGCTCAGTGTTGTGAATATGTCCTTGTTTTACAGTTTAGACTATTTTCCAATCAATcacatattttcagagtttattGAACCTACTAAAAAAGTTTTCAAATGAGGAGTGTGAATACTTATCTACTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113297 True 1235 lncRNA 0.36 2 7266067 7282477

Neighbor

gene id symbol gene type direction distance location
AMCG00017487 rpia,LOC107568642,LOC107695020,LOC107671341,LOC102776079 coding downstream 44322 7210358 ~ 7221745 (-)
AMCG00017485 NA coding downstream 284807 6976937 ~ 6981260 (-)
AMCG00017481 NA coding downstream 492269 6772822 ~ 6773798 (-)
AMCG00017482 NA coding downstream 544674 6718436 ~ 6721393 (-)
AMCG00017476 ankrd50 coding downstream 1055065 6181726 ~ 6211002 (-)
AMCG00017489 NA coding upstream 10379 7292856 ~ 7299945 (-)
AMCG00017490 NA coding upstream 169165 7451642 ~ 7453573 (-)
AMCG00017492 NA coding upstream 206605 7489082 ~ 7491787 (-)
AMCG00017499 NA coding upstream 305474 7587951 ~ 7594082 (-)
AMCG00017500 gba2,LOC104958191,LOC104958190 coding upstream 343094 7625571 ~ 7639260 (-)
G90796 NA non-coding downstream 39224 7221828 ~ 7226843 (-)
G90783 NA non-coding downstream 60206 7205620 ~ 7205861 (-)
G90762 NA non-coding downstream 141893 7065885 ~ 7124174 (-)
G90759 NA non-coding downstream 382099 6883642 ~ 6883968 (-)
G90751 NA non-coding downstream 389099 6760655 ~ 6876968 (-)
G90817 NA non-coding upstream 41253 7323730 ~ 7324107 (-)
G90885 NA non-coding upstream 411106 7693583 ~ 7694005 (-)
G90908 NA non-coding upstream 490741 7773218 ~ 7784195 (-)
G90938 NA non-coding upstream 546021 7828498 ~ 7830609 (-)
G90948 NA non-coding upstream 731918 8014395 ~ 8023105 (-)
G90746 NA other downstream 77419 6733235 ~ 7188648 (-)
G90749 NA other downstream 152886 7112436 ~ 7113181 (-)
G90715 fat4,LOC106611628,LOC106604622 other downstream 877029 6387252 ~ 6389038 (-)
G90502 NA other downstream 2043020 5222473 ~ 5223047 (-)
G90501 NA other downstream 2045046 5158384 ~ 5221021 (-)
AMCG00017497 NA other upstream 385547 7668024 ~ 7679350 (-)
G90937 NA other upstream 548408 7830885 ~ 7832592 (-)
G90939 LOC105903575 other upstream 709660 7992137 ~ 7996595 (-)
AMCG00017520 NA other upstream 1191013 8473490 ~ 8514955 (-)
AMCG00017531 NA other upstream 1450283 8732760 ~ 8748743 (-)

Expression


Co-expression Network