G90877


Basic Information

Item Value
gene id G90877
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7668183 ~ 7671850 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113384
tgtttatttgtttttggtttgcttttgaaatttgtttttaatcattcatacattttcaatcaatAAACTTTCACTTATTAAAGAAGCAGCTTTATAGTTTATGCATGCTGACCAGAAGTAATATGGAGAGGTTTATATACGATGATCTGAACGTTAAGCTGGATGCGTTTAGAGCACCTCATCTTTGCCGTACACTTTCGTTTGAAGAACGAATGGGATCTTACAGGCAGATCTTTGGAACGGCACATGAGAGAGAAGATAGAGCAGAGATCTCGAGCCTTAGACCTGGAGAGCCATAGTCCTGGAGGTTTAATGGGAACTAGAATCTGATTGGAGGCTTGGAAAACACAAGAACTTGCACTCATCAACTACAAGGAAAACCAGGAGACTGTGTGGCTCTCCAGGTATAGGCGTGGACACCACTGAACTAGATAATGGGAAGAGGTTGAAAGGAGAATGGCCTGCAAACAGTACTTTATCCTAAGTGGAGTGTAGAAGAGTGCAGGTGAAACCAGTCTGGCCCTTTCCTGCAATCAGTCTCACCTTAAGCTTGCACCGTGATGGAACTATTCACTATCTATTATGATCATGCACCACTCAGCTGAGCCAGAGGTCTTTAGTGGATGAATCTACGACTACATTGactaaattacacattttacaaagcCTGATTCCTATTGCAACGAGAGGTCGCCGAAGCTGGCTTTAGTAGGAAATACTCTATGTGCTGCATAATCAGAGCAAAGTGCAAGTAAGAGACTGTGGCATCTTCGAATGACAGCACTCCACACAAGATTTActatccatatatattttttttttatttattctttaaattaagattttatcTGACCCGATTTATTAAAGCTGTTCATGGTTTCCAATGATAAGTGCTTCATGTGAGGGTGAAGGAGGGCCCTGGGTACTCAGAGGCTAAGGGTCAGAATCATGGAACATTATCCCACCACAAGTTCACACCAGATATTTCCTGTCCAGAATGAAAAACAACGGGGCTGTGAAAAACCAGACATCTTCACAGAGGTGCATCTGAACTGAGGCTCCTCGGAATTCTACAAAAATCAGGAATGGCTTCAGAGTTTTCTTAAAGAAAGGGGTGTTGTAGTGGAAAATAAGTTGTCAATACTGACCCGATAACTAGACCATGGGCGGACACGAAGTCCCCAGACCAGCTCTCTCTCCCAGGACCCTCCAGTACCCCCGGGGAATAAATAAGCTAAAAATCAGGGAATTCGGGGGTTTCAAGCAAAAACTCTGTACAGCAGTCAGTGTAGAATACAAACTcttgtaagaaaaaatataccATTTAAATTCATTGCCTCTTGTAAAgtacatagaaaaaaaatgaatccccGCCCTACAGCAACCCCCCCATTGTCCCCCACAGCGTCATGTGCAGATTGAGAGCTGCGCAGTGCTGGGATTTCTCAGACAGCACGGCCTGCCTGGGGAGTGTTTGCACGGACAGTGTGGTGCGGAGAACAATGTGATCTgtacaaaacacagagacaacaAATCATGTTTCGCCCCCGTGCAATTTCTCTCCCGTCACACTGGCTGTTCACACTTCTAAACCGTAGTTTGTAATACTCATGCTGTGTGCAACAGGGTCACAGGGGTAAATCAGTAGATCTGAAACTAAGGAGGTACTCCACTCTGTATGTGCGACTCCAGGAGATAGAGATGGGAGGCAGGTTGAGGCAGATTGTGACTGGAACTCTGCGAGAGGGGCTGATGGGACGGTTAGGTCAACCTCTCCGTCCCTCTCACTCTCCTCCCATCCCACCAAACACTCGAGCTCCCCACCGCTAGCAAGTGTCGATACTGCAGAGTGCTGGGGAGGTGTGTGGAATGTTACCCTGGGCTCAGTCCGGGCAGgcgacgcacacgcacacgcacacgcacacgcggtccattaaaacacaaaccagcaCGCAATGCAATGCAACAAAGAGAAATGCAACCTCCCGAATGACCCCGAGTAGCTCCTCCTTCCCAACCACTCCTTTTCAGACGGCGACTGCCACCGCTTCACACCGACTGCACACCGCAGTGCCACTACCCTCCCCTTCAGGCTCGTTCAGTGCAACTCCAAGAAAcgcaaacaaaacaacctgaGAGCAAGCCACAGAGGAGAGAGTGGTTCCGGCAATCAGAAGGGTGTATAGGGCTAGAAAAGTAGGGCCCTCTTCACAGACTCTAGGTGTAATAACCCAGCAAACCCAAGAGCACCCCCACAGGCTGCTGGCCACTCACTTTCTCCCCATATTGGTCTATCATTCTGTTCACTATAGAAACTGCCCCTGCCATTGTTGCCCAGAgcctgggggaaaaaaaaaaaaaagagtggaGGAGGCAGCAAACTCCTCAACACCCCTGAGCAAACATCAGCAATAACAGATATAAttaacaatatgaaaaatatctATACAGAGACAGTGCTGACAGGAACTGGAGCCACATCGAAGGATGAGGACATCCTCCCTATGTCTGTGCCTCCGGGAGGGGCAGGCTGGGCTCGGCACTGTGCCCAGGTAGGCGTGGGGCGGCCGGGAGGGTCTTTGTGTTCCCACAGAGCAGGCTGCGCCGCGCCTCTCCATTCAGGTTCTTATAGGGGGGGGGGTTCCTGCGGGGTCGCAAGCAAGCTGTTGGGAAGCGGAGACCCGCCAGACAGCAGCCCGGACAGGAAATGACCTCGTCCTGCTCCAGGGTGGCTGTGCTGGATCCGTGCAGCGGGAACGAGGGACTCGCAGAGTTCCCGTGATAACCgttgcccccccaccccaagggGTGGCTGACCACCACGGCCGTGTTGTTGTTATCGAGCGGGGACAGCGGGGGCAGCAAGGGCGGGCCATTGGAAACTGGAGAGTTCCAGCCATTGGCCAGCACAGAGGGCGAGGGAGGGCTGAGGCAGGACTGGTTCGGTTGGGGTCCCTCCAGGAACACCGAGCCCTCCAAGGTGTCCGGGCTGCTGGAGCAGTCCATGGGCTCCCCCAGACAAAGAGTCTCCAGATCTCCCTCAGTCAGCATCTCCAGAGACACCAACTCCAGGTCCACGGGTGTCTCCGAGTCCAGCGTCGACCCCCTACTCTCCCCCACCTTCTCCATCCTCCCTGCAGGCTGCCTCATGACCGGCTCGCCCCACCGCTCAGGGTCAGGCATCTGCCCTCCGCCCAACCTGTACGCCACCACATCGATGCCTCTGTCCTGTGGCTCACTGACCCTCAGCTGCCCCTGCCTGTGCTGGGCCAGAGCAACCTGCTCCTCGGAGGGGGCCAAGGTGGGCCGGGTAGGGCGGGGCAGTTCAGGGGTGCAGGGCAGCGAGCGGCAGCGACGAGGGGTCCCTCTGGAATCCCGCCAGGGGTCAGGGGGTGTGGGGGAGGAGCCAGTGCAGGAGTCGGGTGGTTGGGGAAGGGCGAAGGTCAACGAAATGACAGACTTGCTGGGCGTGTCGAACAGCTTGATCTTGCCGCCGTTGAGGTCCTGCCGCTGGGAGAAGGGGTTGACCCGGGCAGGTGTGCCGGAGAGCAGGGGTGGTATCGCAGGCGGCAGCATGTCAGACTGGCTACGGGACAGCCCTCGGTCCCAGGGCAAGCACAGAGAGCGTCGCCGAACAGGGCTGGAGCCAGGGGCCAACAGGGGTCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113384 True 3668 TUCP 0.53 1 7668183 7671850

Neighbor

gene id symbol gene type direction distance location
AMCG00017495 NA coding upstream 1108 7663708 ~ 7667075 (+)
AMCG00017493 NA coding upstream 10058 7655383 ~ 7658125 (+)
AMCG00017496 NA coding upstream 20923 7642275 ~ 7647260 (+)
AMCG00017494 NA coding upstream 61984 7605288 ~ 7606199 (+)
AMCG00017491 pik3c3 coding upstream 193161 7459064 ~ 7475022 (+)
AMCG00017503 NA coding downstream 30264 7702114 ~ 7712194 (+)
AMCG00017510 NA coding downstream 159148 7830998 ~ 7835213 (+)
AMCG00017509 NA coding downstream 320265 7992115 ~ 8023128 (+)
AMCG00017511 NA coding downstream 503880 8175730 ~ 8177002 (+)
AMCG00017514 pdgfra coding downstream 519937 8191787 ~ 8212616 (+)
G90857 NA non-coding upstream 41731 7624692 ~ 7626452 (+)
G90743 NA non-coding upstream 515439 7112416 ~ 7152744 (+)
G90733 NA non-coding upstream 657122 6974661 ~ 7011061 (+)
G90737 NA non-coding upstream 775573 6874967 ~ 6892610 (+)
G90738 NA non-coding upstream 784226 6883654 ~ 6883957 (+)
G90878 NA non-coding downstream 293 7672143 ~ 7672373 (+)
G90879 NA non-coding downstream 6049 7677899 ~ 7678465 (+)
G90905 NA non-coding downstream 118609 7790459 ~ 7790658 (+)
G90915 NA non-coding downstream 179318 7851168 ~ 7851374 (+)
G90917 NA non-coding downstream 250342 7922192 ~ 7922640 (+)
AMCG00017486 NA other upstream 479540 6729738 ~ 7188643 (+)
AMCG00017446 NA other upstream 2979960 4662625 ~ 4688223 (+)
AMCG00017445 NA other upstream 3061612 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 4972730 2687420 ~ 2695453 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 7456247 207586 ~ 211936 (+)
G90881 NA other downstream 20735 7692585 ~ 7693347 (+)
AMCG00017508 NA other downstream 134528 7806378 ~ 7813639 (+)
G90955 NA other downstream 460518 8132368 ~ 8132854 (+)
AMCG00017526 paics,LOC107555752 other downstream 1015847 8687697 ~ 8700754 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other downstream 1079863 8751713 ~ 8764903 (+)

Expression


Co-expression Network