G90878


Basic Information

Item Value
gene id G90878
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7672143 ~ 7672373 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113385
TCACCGCTGCCAGATTGATCTCCTCACCCACgctctccctcgctccctccctcgTCTCCAGCTCCGCAACAATCTCTGAGAATGAGGGACGCCGGTCTGCATTCATCTGAGAGACACGACCGGAAGAGTGCAATGGAGGAGGAGAGTTCCGGAGAGATGCGAgtaggagagtggagaggaggagaaatGAGGGGGAGACCGCAAGGAGAAGGCGTGGGGTGGGGAAGAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113385 True 231 lncRNA 0.59 1 7672143 7672373

Neighbor

gene id symbol gene type direction distance location
AMCG00017495 NA coding upstream 5068 7663708 ~ 7667075 (+)
AMCG00017493 NA coding upstream 14018 7655383 ~ 7658125 (+)
AMCG00017496 NA coding upstream 24883 7642275 ~ 7647260 (+)
AMCG00017494 NA coding upstream 65944 7605288 ~ 7606199 (+)
AMCG00017491 pik3c3 coding upstream 197121 7459064 ~ 7475022 (+)
AMCG00017503 NA coding downstream 29741 7702114 ~ 7712194 (+)
AMCG00017510 NA coding downstream 158625 7830998 ~ 7835213 (+)
AMCG00017509 NA coding downstream 319742 7992115 ~ 8023128 (+)
AMCG00017511 NA coding downstream 503357 8175730 ~ 8177002 (+)
AMCG00017514 pdgfra coding downstream 519414 8191787 ~ 8212616 (+)
G90857 NA non-coding upstream 45691 7624692 ~ 7626452 (+)
G90743 NA non-coding upstream 519399 7112416 ~ 7152744 (+)
G90733 NA non-coding upstream 661082 6974661 ~ 7011061 (+)
G90737 NA non-coding upstream 779533 6874967 ~ 6892610 (+)
G90738 NA non-coding upstream 788186 6883654 ~ 6883957 (+)
G90879 NA non-coding downstream 5526 7677899 ~ 7678465 (+)
G90905 NA non-coding downstream 118086 7790459 ~ 7790658 (+)
G90915 NA non-coding downstream 178795 7851168 ~ 7851374 (+)
G90917 NA non-coding downstream 249819 7922192 ~ 7922640 (+)
G90919 NA non-coding downstream 290670 7963043 ~ 7963276 (+)
G90877 NA other upstream 293 7668183 ~ 7671850 (+)
AMCG00017486 NA other upstream 483500 6729738 ~ 7188643 (+)
AMCG00017446 NA other upstream 2983920 4662625 ~ 4688223 (+)
AMCG00017445 NA other upstream 3065572 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 4976690 2687420 ~ 2695453 (+)
G90881 NA other downstream 20212 7692585 ~ 7693347 (+)
AMCG00017508 NA other downstream 134005 7806378 ~ 7813639 (+)
G90955 NA other downstream 459995 8132368 ~ 8132854 (+)
AMCG00017526 paics,LOC107555752 other downstream 1015324 8687697 ~ 8700754 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other downstream 1079340 8751713 ~ 8764903 (+)

Expression


Co-expression Network