G90879


Basic Information

Item Value
gene id G90879
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7677899 ~ 7678465 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113386
AATAGGTGACCAACTGACCTGTACACAGGGATTTTCTCTGCCAGCCCGAAGTCTCCCACCACAGCAGTGAAGTGGCCGCTGTCACAGCGAACCAGACAgttctacagagagagagagcgagagagagagagatggagtgggggagggggatcTCGAATTTGTGGAGAATGTGCGTCCATCTTTAACCTTTGGATTTGAAAATGGGGTAAAATGTACACTCCCGCAGGACAATTCACACTGTGAGGATCAGCGTGATTTAGAAGCTAGATCAGACGGCGCTTTGATGCAAGGACCCTGTGCCACTGTGTGCATGCACATATTATAGGATACTTCCACTATTTCTACACCAAGTAGATCACCAAAATGTTAAATGGACACAAATTCATAAAGAGAAGGATAATTTTCAGAGATGTGTGCAGTACCTTGGAGGTGAGGTCCCTGTGGAAGATGCCCTTGCCGTGTAGGTACTGCAGCCCCCGGGCGATGTCCAGCGACAGGCCCTCCCTCACGGCCCAGGACAGGTACACATCACTGTCCAGCAGCTGCTCCAGATTGCCCCCATTAATG

Function

NR:

description
PREDICTED: semaphorin-4G-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113386 True 567 lncRNA 0.50 1 7677899 7678465

Neighbor

gene id symbol gene type direction distance location
AMCG00017495 NA coding upstream 10824 7663708 ~ 7667075 (+)
AMCG00017493 NA coding upstream 19774 7655383 ~ 7658125 (+)
AMCG00017496 NA coding upstream 30639 7642275 ~ 7647260 (+)
AMCG00017494 NA coding upstream 71700 7605288 ~ 7606199 (+)
AMCG00017491 pik3c3 coding upstream 202877 7459064 ~ 7475022 (+)
AMCG00017503 NA coding downstream 23649 7702114 ~ 7712194 (+)
AMCG00017510 NA coding downstream 152533 7830998 ~ 7835213 (+)
AMCG00017509 NA coding downstream 313650 7992115 ~ 8023128 (+)
AMCG00017511 NA coding downstream 497265 8175730 ~ 8177002 (+)
AMCG00017514 pdgfra coding downstream 513322 8191787 ~ 8212616 (+)
G90878 NA non-coding upstream 5526 7672143 ~ 7672373 (+)
G90857 NA non-coding upstream 51447 7624692 ~ 7626452 (+)
G90743 NA non-coding upstream 525155 7112416 ~ 7152744 (+)
G90733 NA non-coding upstream 666838 6974661 ~ 7011061 (+)
G90737 NA non-coding upstream 785289 6874967 ~ 6892610 (+)
G90905 NA non-coding downstream 111994 7790459 ~ 7790658 (+)
G90915 NA non-coding downstream 172703 7851168 ~ 7851374 (+)
G90917 NA non-coding downstream 243727 7922192 ~ 7922640 (+)
G90919 NA non-coding downstream 284578 7963043 ~ 7963276 (+)
G90921 NA non-coding downstream 287855 7966320 ~ 7966608 (+)
G90877 NA other upstream 6049 7668183 ~ 7671850 (+)
AMCG00017486 NA other upstream 489256 6729738 ~ 7188643 (+)
AMCG00017446 NA other upstream 2989676 4662625 ~ 4688223 (+)
AMCG00017445 NA other upstream 3071328 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 4982446 2687420 ~ 2695453 (+)
G90881 NA other downstream 14120 7692585 ~ 7693347 (+)
AMCG00017508 NA other downstream 127913 7806378 ~ 7813639 (+)
G90955 NA other downstream 453903 8132368 ~ 8132854 (+)
AMCG00017526 paics,LOC107555752 other downstream 1009232 8687697 ~ 8700754 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other downstream 1073248 8751713 ~ 8764903 (+)

Expression


Co-expression Network