G90881


Basic Information

Item Value
gene id G90881
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7692585 ~ 7693347 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113388
ACCTTGAAAACGTCCGAGAAAAACCCCGAGCCGATCTTCTCACAGTAGAAGTCGTCGATGCGGGCCAGGCTGGACACGGCGCTGCGCAGGGCCCTATAGGAGGAGGGCCGGAGCCGGTTGGGCACTGGTGTCCCCTGGGTGGAGGGATCAGTGGGCTCCTGGTCCAACTCGGCCCGGTCCATATTGGTAATCCCACACGGAGCTTTCAACACGACGGAGCGGCGCTGCCAAGTGTTCACATCTCCCCCCGGTGCACCCGGCAGCCGCGTCTCCTTCACGGGTAATGCGTTAGTGCAGGAGACACCCACAAACCACGGTCTCCCCCCGCTTACTAAACAGGAAAAAGCCACTGTGCTCCGGGGCGGACGCACACAAGCAGCGCTCGTCGCAAACCGGGGGCAGCCGCTCTCGCACGCATGTCGCAGGGCTTCTCCTCTAAAGGTCGCCGCATTCTCCTTCAGCACAGACGGCCATCCGGCGCCCCGCGATGCGGCTGCCTCGGCGGTGGTGTGGGGAGCGAGGTGAGCCCGGCCCCGGGCCCCCGGCCGCTCTCCTCCAGGTGTGGGACGCGGGGACACACGTCAGCGCCCCTCCGCTGTCACACCGGCCGCCCGCCGCTGGGGCTTTCCCGGCCGCCCGCTCGGAAGCGCCGCCGCAGCGCCCCTCCTGCCGCCCGTCCCCGCACCGATGGCAGCGCCTGGGAGGCTGAAGTGTGCGCCGCGGCCGCTGCGGAGGAGAAAATGGAGCTGGCTGGATGTATTTG

Function

GO: NA

KEGG:

id description
ko00603 Glycosphingolipid biosynthesis - globo and isoglobo series

RNA

RNA id representative length rna type GC content exon number start site end site
TU113388 True 763 TUCP 0.68 1 7692585 7693347

Neighbor

gene id symbol gene type direction distance location
AMCG00017495 NA coding upstream 25510 7663708 ~ 7667075 (+)
AMCG00017493 NA coding upstream 34460 7655383 ~ 7658125 (+)
AMCG00017496 NA coding upstream 45325 7642275 ~ 7647260 (+)
AMCG00017494 NA coding upstream 86386 7605288 ~ 7606199 (+)
AMCG00017491 pik3c3 coding upstream 217563 7459064 ~ 7475022 (+)
AMCG00017503 NA coding downstream 8767 7702114 ~ 7712194 (+)
AMCG00017510 NA coding downstream 137651 7830998 ~ 7835213 (+)
AMCG00017509 NA coding downstream 298768 7992115 ~ 8023128 (+)
AMCG00017511 NA coding downstream 482383 8175730 ~ 8177002 (+)
AMCG00017514 pdgfra coding downstream 498440 8191787 ~ 8212616 (+)
G90879 NA non-coding upstream 14120 7677899 ~ 7678465 (+)
G90878 NA non-coding upstream 20212 7672143 ~ 7672373 (+)
G90857 NA non-coding upstream 66133 7624692 ~ 7626452 (+)
G90743 NA non-coding upstream 539841 7112416 ~ 7152744 (+)
G90733 NA non-coding upstream 681524 6974661 ~ 7011061 (+)
G90905 NA non-coding downstream 97112 7790459 ~ 7790658 (+)
G90915 NA non-coding downstream 157821 7851168 ~ 7851374 (+)
G90917 NA non-coding downstream 228845 7922192 ~ 7922640 (+)
G90919 NA non-coding downstream 269696 7963043 ~ 7963276 (+)
G90921 NA non-coding downstream 272973 7966320 ~ 7966608 (+)
G90877 NA other upstream 20735 7668183 ~ 7671850 (+)
AMCG00017486 NA other upstream 503942 6729738 ~ 7188643 (+)
AMCG00017446 NA other upstream 3004362 4662625 ~ 4688223 (+)
AMCG00017445 NA other upstream 3086014 4592802 ~ 4606571 (+)
AMCG00017422 leprotl1,LOC103152176 other upstream 4997132 2687420 ~ 2695453 (+)
AMCG00017508 NA other downstream 113031 7806378 ~ 7813639 (+)
G90955 NA other downstream 439021 8132368 ~ 8132854 (+)
AMCG00017526 paics,LOC107555752 other downstream 994350 8687697 ~ 8700754 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other downstream 1058366 8751713 ~ 8764903 (+)
G91281 LOC103376870 other downstream 1826426 9519773 ~ 9583280 (+)

Expression


Co-expression Network