Gene
RNA
| Item | Value |
|---|---|
| gene id | G90922 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 7968120 ~ 7968328 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU113436 | True | 209 | lncRNA | 0.38 | 1 | 7968120 | 7968328 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017510 | NA | coding | upstream | 132907 | 7830998 ~ 7835213 (+) |
| AMCG00017503 | NA | coding | upstream | 255926 | 7702114 ~ 7712194 (+) |
| AMCG00017495 | NA | coding | upstream | 301045 | 7663708 ~ 7667075 (+) |
| AMCG00017493 | NA | coding | upstream | 309995 | 7655383 ~ 7658125 (+) |
| AMCG00017496 | NA | coding | upstream | 320860 | 7642275 ~ 7647260 (+) |
| AMCG00017509 | NA | coding | downstream | 23787 | 7992115 ~ 8023128 (+) |
| AMCG00017511 | NA | coding | downstream | 207402 | 8175730 ~ 8177002 (+) |
| AMCG00017514 | pdgfra | coding | downstream | 223459 | 8191787 ~ 8212616 (+) |
| AMCG00017515 | NA | coding | downstream | 279631 | 8247959 ~ 8282506 (+) |
| AMCG00017518 | NA | coding | downstream | 391852 | 8360180 ~ 8376658 (+) |
| G90921 | NA | non-coding | upstream | 1512 | 7966320 ~ 7966608 (+) |
| G90919 | NA | non-coding | upstream | 4844 | 7963043 ~ 7963276 (+) |
| G90917 | NA | non-coding | upstream | 45480 | 7922192 ~ 7922640 (+) |
| G90915 | NA | non-coding | upstream | 116746 | 7851168 ~ 7851374 (+) |
| G90905 | NA | non-coding | upstream | 177462 | 7790459 ~ 7790658 (+) |
| G90924 | NA | non-coding | downstream | 21368 | 7989696 ~ 7989960 (+) |
| G90991 | NA | non-coding | downstream | 260987 | 8229315 ~ 8229576 (+) |
| G91004 | NA | non-coding | downstream | 317964 | 8286292 ~ 8286728 (+) |
| G91104 | NA | non-coding | downstream | 764040 | 8732368 ~ 8732632 (+) |
| G91128 | NA | non-coding | downstream | 815539 | 8783867 ~ 8784089 (+) |
| AMCG00017508 | NA | other | upstream | 154481 | 7806378 ~ 7813639 (+) |
| G90881 | NA | other | upstream | 274773 | 7692585 ~ 7693347 (+) |
| G90877 | NA | other | upstream | 296270 | 7668183 ~ 7671850 (+) |
| AMCG00017486 | NA | other | upstream | 779477 | 6729738 ~ 7188643 (+) |
| AMCG00017446 | NA | other | upstream | 3279897 | 4662625 ~ 4688223 (+) |
| G90955 | NA | other | downstream | 164040 | 8132368 ~ 8132854 (+) |
| AMCG00017526 | paics,LOC107555752 | other | downstream | 719369 | 8687697 ~ 8700754 (+) |
| AMCG00017527 | tkfc,LOC107731922,LOC107095500 | other | downstream | 783385 | 8751713 ~ 8764903 (+) |
| G91281 | LOC103376870 | other | downstream | 1551445 | 9519773 ~ 9583280 (+) |
| G91452 | cc2d2a | other | downstream | 3911286 | 11879614 ~ 11880499 (+) |
