G90938


Basic Information

Item Value
gene id G90938
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 7828498 ~ 7830609 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113454
TAGAGACTGGTTTCATTGTAACTCcactttacatttatatattttttatcttcaCATCTGTAACGCTCTCTTTTACGGATAATATGTGGTTTGAATCCACTGTGAGCACAGGACACAGACAGCAAATGCGTTGTTCCAAATCGTTATACTttcaatgtttctttattttattttattttttgtcagtgtGTCCTGAgatcaaataatacatttgaagttAACACTGCCTTGCAGTAGCACGGTTTTACATCTTGACTGTGAAATAATGTGAAGCCTCCGTGCAATGAGTCTTGAGTCCAAAAATAAAGCTGCGTTTCACTAGGAGACAACGTGGGGAAAGTCAACAGCAAAAAGCtaaactatattttattattttgcggGCGTTTTAATTAGACTTTCAGCATCATCCAAAATAATAGGGGTTAGGTTGGGGTTAAAACCCTACATTTATTATGAATGTGGAGTCATATCTGAACAACATGCATATCTGAGTGGTGTGTGGAAGAATCTGTGCTTACATTGTGCATTTGACTCCTGTATCCAGATATGAATACAGCCATGCAGACCCATATCAAATTATAATGAAGGTATTTGCACATGTAGGTATATATTCCTAATAATAGGTATTACATGTATTCATACacataataatgaaacaaatttTATAATATGTTCTGTGTATGGGGATCCTATATTCAGTGCAGTGAAGGTTACTAAGAAAGACATCTACCTGCGAAAGAAAGTGTGAGGTTGACAAGTTCAGACTTGTGTAGATACCCCCATGTACCCACTTTACACATACGCACAAGCACAGTTAACTTAACCGAGGTGTTGATGTCTTCCTGATACTGTAACAAAAGCAGGCGTGTTGAGGTGGCTTGTTCTCAAGATGTTGGACACTGTATGAGGCATTAACCAAGTCATCCAGAACCCCTTCGCATTtgtcacacacagcacaagagCGTGCGACTCTACCCATGACTGAAAGTGTGACACCtttttgtgctgtttgtgtttactttgttttggggggtgggtATTACGTTGCCAATGTCAATGGCATCTTCTCATCACCAGTCTTTCTAATGTTCATCATTTCTTGCCTTTCcaaatgtatgtgtaaatgCGTGACAGCTGGAATGGCCAATCAAGATGTTCTGTATTGGTTCAGTGGGGAAGAGCTTGTGTCCAAGAGAACCAGCAGAAACCTGTTAAAACAGATCAGCTATAAATTCCTGTTTTAGGTGGTTAACAGGAATGGCATATTGTGCTCTTTTATTATCCATATTTCCGCTTAAAAACAACTTCACTTctgtttatataatattgtgCTCCATGTTAAACAGGCCACTCATCACTTGCCATGAATTGGAAATGGATCGCAGTGCATTAGTAGATAGTGCAGCTGTTTACAGTATTACTTTTTCTgccacaaattaaaaagtgttcTGGTTTTAAATTGTGGTGCTTTGCCAGGTTGAATGTGTAGAATACTGTAATCAAAAACTTTGTCATGTTTAACATTGCGTTCATTTTGCTGGTGCATCTGTTTAATGGTGCAGGGCTTGTATAAACTCAAGTGTTACATTGTGTTGATACTCAGAGATAACTCCTTTGCCAAGCCCAAGATGTCCATCTCCTAGCCTAAAATAGCcagtttctgtttctttgtttcactTCGCCATACTGGTGTTTCTACTTGTTAGTTAACTTCCATATCTgatttcttgttcttttttccttttttcccttttctttcactttccCATCATGTGTCTGCTGAAGTATTTGGCAGGCAGGCTTCTTGTTATTATAGTCTGGAATGTATATTTGATAAGAGCTGTGATGACAGACTCCtgctgaaatataaaatgaatgtgttttatttgcagCAGACAGGTCCCCGCTGTCTACTACCAGCACTCAGGCATCTCAGACCGTGAAGTTAGAACCAATTAGCTTCTATTTAGGGTATGTTGTACATAAAAATGAGGATATTAATAGCTCTACATTTGTTCGCTTAATTCTTTATACACATGAGACATTGTatggatttttatgtttttaatttaatgtaatacttGATTATTGTAAATAACAGAACTTATTAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113454 True 2112 lncRNA 0.37 1 7828498 7830609

Neighbor

gene id symbol gene type direction distance location
AMCG00017505 usp46,LOC106533691 coding downstream 34899 7781052 ~ 7793599 (-)
AMCG00017504 NA coding downstream 52143 7755657 ~ 7776355 (-)
AMCG00017502 NA coding downstream 166665 7660846 ~ 7661833 (-)
AMCG00017501 NA coding downstream 167836 7658067 ~ 7660662 (-)
AMCG00017498 NA coding downstream 178390 7647646 ~ 7650108 (-)
AMCG00017507 NA coding upstream 13037 7843646 ~ 7851221 (-)
AMCG00017506 NA coding upstream 159184 7989793 ~ 7991440 (-)
AMCG00017513 NA coding upstream 193047 8023656 ~ 8042454 (-)
AMCG00017512 chic2,LOC101486940,LOC103353160,LOC107714214,LOC107562985,LOC102236523 coding upstream 311831 8142440 ~ 8161444 (-)
AMCG00017516 NA coding upstream 498538 8329147 ~ 8349988 (-)
G90908 NA non-coding downstream 44303 7773218 ~ 7784195 (-)
G90885 NA non-coding downstream 134493 7693583 ~ 7694005 (-)
G90817 NA non-coding downstream 504391 7323730 ~ 7324107 (-)
G90805 NA non-coding downstream 546021 7266067 ~ 7282477 (-)
G90796 NA non-coding downstream 601655 7221828 ~ 7226843 (-)
G90948 NA non-coding upstream 183786 8014395 ~ 8023105 (-)
G90956 NA non-coding upstream 301786 8132395 ~ 8132854 (-)
G90964 NA non-coding upstream 330926 8161535 ~ 8162113 (-)
G90965 NA non-coding upstream 334045 8164654 ~ 8164905 (-)
G90992 NA non-coding upstream 398706 8229315 ~ 8229561 (-)
AMCG00017497 NA other downstream 149148 7668024 ~ 7679350 (-)
G90746 NA other downstream 639850 6733235 ~ 7188648 (-)
G90749 NA other downstream 715317 7112436 ~ 7113181 (-)
G90715 fat4,LOC106611628,LOC106604622 other downstream 1439460 6387252 ~ 6389038 (-)
G90502 NA other downstream 2605451 5222473 ~ 5223047 (-)
G90937 NA other upstream 276 7830885 ~ 7832592 (-)
G90939 LOC105903575 other upstream 161528 7992137 ~ 7996595 (-)
AMCG00017520 NA other upstream 642881 8473490 ~ 8514955 (-)
AMCG00017531 NA other upstream 902151 8732760 ~ 8748743 (-)
G91119 NA other upstream 924679 8755288 ~ 8755907 (-)

Expression


Co-expression Network