Gene
RNA
| Item | Value |
|---|---|
| gene id | G90939 |
| gene name | LOC105903575 |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 7992137 ~ 7996595 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: pre-mRNA 3'-end-processing factor FIP1-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU113456 | True | 550 | TUCP | 0.44 | 5 | 7992137 | 7996595 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017506 | NA | coding | downstream | 697 | 7989793 ~ 7991440 (-) |
| AMCG00017507 | NA | coding | downstream | 140916 | 7843646 ~ 7851221 (-) |
| AMCG00017505 | usp46,LOC106533691 | coding | downstream | 198538 | 7781052 ~ 7793599 (-) |
| AMCG00017504 | NA | coding | downstream | 215782 | 7755657 ~ 7776355 (-) |
| AMCG00017502 | NA | coding | downstream | 330304 | 7660846 ~ 7661833 (-) |
| AMCG00017513 | NA | coding | upstream | 27061 | 8023656 ~ 8042454 (-) |
| AMCG00017512 | chic2,LOC101486940,LOC103353160,LOC107714214,LOC107562985,LOC102236523 | coding | upstream | 145845 | 8142440 ~ 8161444 (-) |
| AMCG00017516 | NA | coding | upstream | 332552 | 8329147 ~ 8349988 (-) |
| AMCG00017519 | clocka,clock,LOC107701480 | coding | upstream | 390467 | 8387062 ~ 8416479 (-) |
| AMCG00017524 | NA | coding | upstream | 610464 | 8607059 ~ 8627186 (-) |
| G90938 | NA | non-coding | downstream | 161528 | 7828498 ~ 7830609 (-) |
| G90908 | NA | non-coding | downstream | 207942 | 7773218 ~ 7784195 (-) |
| G90885 | NA | non-coding | downstream | 298132 | 7693583 ~ 7694005 (-) |
| G90817 | NA | non-coding | downstream | 668030 | 7323730 ~ 7324107 (-) |
| G90805 | NA | non-coding | downstream | 709660 | 7266067 ~ 7282477 (-) |
| G90948 | NA | non-coding | upstream | 17800 | 8014395 ~ 8023105 (-) |
| G90956 | NA | non-coding | upstream | 135800 | 8132395 ~ 8132854 (-) |
| G90964 | NA | non-coding | upstream | 164940 | 8161535 ~ 8162113 (-) |
| G90965 | NA | non-coding | upstream | 168059 | 8164654 ~ 8164905 (-) |
| G90992 | NA | non-coding | upstream | 232720 | 8229315 ~ 8229561 (-) |
| G90937 | NA | other | downstream | 159545 | 7830885 ~ 7832592 (-) |
| AMCG00017497 | NA | other | downstream | 312787 | 7668024 ~ 7679350 (-) |
| G90746 | NA | other | downstream | 803489 | 6733235 ~ 7188648 (-) |
| G90749 | NA | other | downstream | 878956 | 7112436 ~ 7113181 (-) |
| G90715 | fat4,LOC106611628,LOC106604622 | other | downstream | 1603099 | 6387252 ~ 6389038 (-) |
| AMCG00017520 | NA | other | upstream | 476895 | 8473490 ~ 8514955 (-) |
| AMCG00017531 | NA | other | upstream | 736165 | 8732760 ~ 8748743 (-) |
| G91119 | NA | other | upstream | 758693 | 8755288 ~ 8755907 (-) |
| AMCG00017556 | NA | other | upstream | 2364705 | 10361300 ~ 10497104 (-) |
| AMCG00017563 | NA | other | upstream | 3507429 | 11504024 ~ 11506820 (-) |
