G91016


Basic Information

Item Value
gene id G91016
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 8289765 ~ 8381670 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113539
agcaaacaaacactaagATGTAATCAAATTGGATCTCTGGTCTCCTGAGACTTTAAAACATGTGCTTTGtatattatgaaaatgtttatgaTGCAAAAATAATCACTTCAACTCAAATATGTGTCATCAAACTACTGAACGGTCATCCTTGGTTTGTTGCCTTGTAGCAAACGATTCACAAACGCAGtgaatatgtttaattattccGAGTTTGGCTCTTGTGTGTCTATTCCTACTGAATTGGGCTTACATTTGCATCGAAACCCTATATTGTAGTCTTGACTCATTTCCCCCCCTCTTCGTCATTGCAGTAATCAGGAAGAATCCAATGCAGCATGGATTTAAAATGGTGGCTAATATCACACCGTGGAAGAgattttattggtttaatttggaacattatttatatgaatCAGGGTTTACAATCATCTATTCTTCTGCATCACAACGATGTGGCTCAATATTTCCTTTGTAGTCGGTCAAGTTGCTTTGTGTCAAATATTGACAATGTAGTTACCTTGTAAGTTTTCAACCCGGCAAATGTAAAATTTCCCTGACATGTACAGtacctgatttaaaaaaaaaaaaaaaaactagcaaaaatattttaaatcttcacactaatttcattaaataaatacaaaactgccACTGAGTCCAGAAGAAATATCTTCAAACTGTTAAGATGGCCCTGGCCTTGTTTCTTATTACAATGTAGTCAATAAGTAGCAGTAAACATTTCCTATATTTGAAGACTTCTTCtaccaaaataaagaaattgctTGAAGAGCACACGCAGTGAATGGGTCGCAAACTCACAAAAGAGCAGGACTGGAGCGGAACCATACATGTACGGCTTCCATCACACAGATGaataattgtacatatatacagaaaatactCTGGATGAATCTTCACACAGCACAGGAATACAAATCGGTCAAAATCCAGCATCTGGCTTGATGAAGAGAGCCGAGAGGGCAAATGCCAAGAACACAATCCCACCGATTATCGTAaGTTCGGACAGATATTTTCTGAGCAATCATCCGTCCTCCAATCACTGCCAGTCCTGTGCACAGGCAGTGCCCCAGCGTTCCGCCAACAGCTACCCCGAAAGGATCCTGAAGAGATGCAATATAAGAACAGTCAGAGCTGAAAGAACTCACTCCGACAAAAGTGTTATCTGGTGATGCCATTGGCtcacaaaatattgtaattaaatgacaattacatatatacacacacattcattgaAGATTTGGGGACACTGCTTCAGTTGAGTCATTGGGGTGTGTACAATTGTGTGAAGAAACAACTCCCAAAGGTTCattcaaagaataaaaaataaaaaaacaagagcagTGGCCCAGCACATTAGGAACGCATGCAGCCCGAGTCGGGTTTTAAGCCTCCCATTCCACATCTGTTATAGAAGGAGCTTTTACGGGTTCGGCACAGCACTGTCATGGAAGCGCAGGCGGCTTCTCTCACAGACCTCTCGAGCTGCCAGCACAATGGTGGTCAACTGGGAGCGGTCACCCCATTCTGCCAGGAACGTGAGGGTGAAGGCCTGGATGAAGATCGGGGAGATGACACTCTGCCACTTCTTCTGGGGCATGCTGGTTCCAGAGCCGGCTTCCACgccttcatccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113539 True 1654 lncRNA 0.41 3 8289765 8381670

Neighbor

gene id symbol gene type direction distance location
AMCG00017512 chic2,LOC101486940,LOC103353160,LOC107714214,LOC107562985,LOC102236523 coding downstream 128321 8142440 ~ 8161444 (-)
AMCG00017513 NA coding downstream 247311 8023656 ~ 8042454 (-)
AMCG00017506 NA coding downstream 298325 7989793 ~ 7991440 (-)
AMCG00017507 NA coding downstream 438544 7843646 ~ 7851221 (-)
AMCG00017505 usp46,LOC106533691 coding downstream 496166 7781052 ~ 7793599 (-)
AMCG00017519 clocka,clock,LOC107701480 coding upstream 5392 8387062 ~ 8416479 (-)
AMCG00017524 NA coding upstream 225389 8607059 ~ 8627186 (-)
AMCG00017529 NA coding upstream 281980 8663650 ~ 8677813 (-)
AMCG00017530 ppat,LOC106560282 coding upstream 298143 8679813 ~ 8694359 (-)
AMCG00017528 NA coding upstream 320208 8701878 ~ 8730713 (-)
G91005 NA non-coding downstream 2648 8286889 ~ 8287117 (-)
G90992 NA non-coding downstream 60204 8229315 ~ 8229561 (-)
G90965 NA non-coding downstream 124860 8164654 ~ 8164905 (-)
G90964 NA non-coding downstream 127652 8161535 ~ 8162113 (-)
G90956 NA non-coding downstream 156911 8132395 ~ 8132854 (-)
G91064 NA non-coding upstream 221951 8603621 ~ 8605626 (-)
G91294 NA non-coding upstream 1213260 9594930 ~ 9595162 (-)
G91297 NA non-coding upstream 1250975 9632645 ~ 9632859 (-)
G91298 NA non-coding upstream 1280894 9662564 ~ 9662788 (-)
G91300 NA non-coding upstream 1293876 9675546 ~ 9675779 (-)
G90939 LOC105903575 other downstream 293170 7992137 ~ 7996595 (-)
G90937 NA other downstream 457173 7830885 ~ 7832592 (-)
AMCG00017497 NA other downstream 610415 7668024 ~ 7679350 (-)
G90746 NA other downstream 1101117 6733235 ~ 7188648 (-)
AMCG00017520 NA other upstream 91820 8473490 ~ 8514955 (-)
AMCG00017531 NA other upstream 351090 8732760 ~ 8748743 (-)
G91119 NA other upstream 373618 8755288 ~ 8755907 (-)
AMCG00017556 NA other upstream 1979630 10361300 ~ 10497104 (-)
AMCG00017563 NA other upstream 3122354 11504024 ~ 11506820 (-)

Expression


Co-expression Network