G91301


Basic Information

Item Value
gene id G91301
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 9677471 ~ 9680221 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113907
TTGGTATTGACCTTATTATGTTTGTATAAAAGATAATCCACCCCTCAAAAAATGTACATCTAAAtgttatatgtttgtatttataagtTTGAAACCCCAAACTAGGAAAAGTCATATAATTATaggtaattaaaaaagaaagcagcCATTTAGGTTACATCATAggggttacatttatgattagaaaaaagttgcatcttactaaaaatgcagctgcacctgagtacagttctgtagttttctattagctgCACACATTGGCCTGGATGTAatcaaatgttatatataaacaccaacagaaaactaaaaaagccGATActtgaaaatgaatttattttcgGGTAAAGGGCAGAATCATCAAGTGATTTACAATATGCACACTGGTTGAGATTGTCATAGGGTTTGTAtgcacaaaacaacatttgCACACCAGTTAGAATTGAATAATGATGATGTTCATAGAAAAGTATcttattaaaatactaaatgaaaCATCTATGCATatggaatatatattattgcattatCTGCTAAAAAGATAATCATATCATGATTATATGATTATCTTTTTTGTTGATTCTATCCTCTCCAGtttctttacaaatacatattaatgactattctatatttacaaatatataggTTATGTTTTTGAAGATTGGTTCACAGGTGATGGATTGCATTGGGACTGCATGGCTTTTGAGTTCATTGGGTGGTTAATAACTGCATTTGACTATTTAAAAAACTGACAGAATGAGGTTTTTCAAGTAATAATACAACATATGCATACCAATATTATATGAATTTCATAACAAgcacatataaaacatttacaacataaaacacatgCAAGATGTTACCTTaccaaaaaataacattgataGAAATGGATACATTGTTACTTATTCataaaattgttaaaacaatGAATACGTTTTAAACCTTTGTACACTGTGAGGATGCTATATGGTACATATaagtattttgtatattgttaaGAGTGTGGATTTTAATGGCAGTATCATAACATTCTGGTAGTTATGTTATCGATTAATGCTAAGTGCTAAACAATGCTAAGTGTAAATGACATAGTGATTCATAGAAAGACcatgggcaggattaaatcaaaaatatttgcAAGGTGCAAACGCGAAAAGTTGCGGAAATcagaactttgacccacccgctaataggaaactacaaacctgtacatcacagtGGTTACATTCATGactagaagaaagtggcatcttactaaaaatgaagccgcaactgagtacagttctgtagttttctattagcgggtgggtcaaaattttgatttaatccagcccttaatACCACGATAATTTAGCAGCGtgatttccattcgcagacatgccgctaatgcttctgtgagcGACTTGCAAGCacgaacattttttatttaatcctgccccatgTCTCCTATCTGTTTgtgactgtgtttttttaacttgagCATTATACTGGAAATAAtccaaattaaaccaaaacatcCATTCCTTTACTAACCTGCAGTAACAGATTGGATTTGATttcagtaaaaaacaacaaaaaaaaaaacatagttctTTCTTTAATACTTTtagatatattaaattaaataagcttaAAATAGAAAAGTAGAGCGACTTATAATTGTtccaatatatcacattattttaacatacaattacccatttacacagctgggtttttactgcaGCAACAGgtaaagtgccttgctcaagggtacagcagcactGTCCGCCCACgtgggattgaacccacgactCCCACTCCAGAGTGCAGAGCCCTAAACGCTCCTCCCATCcatcattatcattatgttaatacaaattcaatacTGGAGATTCCCATACACGtatcttcagccttgagaacCAGACTGTGTATCAAAGTAATGGgttgtttctcttttcctctGGAAATATTGCTAGCTATTGTTTATAAAGCACCTGTCCTTCCATATAAGAGTTATACAATGTAATGTTCtgctaaaaataatgtaaattgaGAATATTCTTAAAGAGAGAATAAATGGATAATGGCAGTGTcctcaaacaacacaaaagcacatGACCATGCTTATGAAGATAACAAACCTAAACAATGTCTCAGATAGTGTAAATGCTAATGTTGTCCTATTGCATTTAACCTACAATTGTATAAAAGTTTTATTTGTTCACTATATCTCAGTAATCTTGATAATACAGTGGAAGCGAATGATAAACTGAGTTTAACAACCTCCATTATGATTCCTTTCCAGAAGATAACATTGATTGTAAGAAAAACGGAATACTGCTTGCATGTgtccacacatacatacacacacgtgtgcgtgtgtttgtgtgtgtgattaaaaaaatattcctttttCAGATCTATGCCTCTTTTAAGGTTCTGTTGCTTTTACTCAGCACCGCATTAAGTTCTTGTAAAAGATTTGGAGGCATCTGTGCTTCACATCCAAACATGGCTTTTCTTGGTAAAGCCTTGGGGTGTCTTTTATCACTTGATTGGCTGTGCTTGGAATCACAATGGGAAGGATCAGAATGCGCTTGGTATGCTGTTCCCCTTTTCTGTTTCACATTGAAAATAgatgcttctttgtgttttaaGCAGTCAGCCaccaaagcttttttttgttgtactcTGCTATTAgcatttctttcacatttcTTCACTTCAGTGGGAGCATTTAAGTCATTTGATTTCCTGTCAATCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113907 True 2751 lncRNA 0.34 1 9677471 9680221

Neighbor

gene id symbol gene type direction distance location
AMCG00017554 NA coding downstream 130157 9495728 ~ 9547314 (-)
AMCG00017550 nwd2 coding downstream 305392 9342114 ~ 9372079 (-)
AMCG00017548 NA coding downstream 391968 9245216 ~ 9285503 (-)
AMCG00017549 NA coding downstream 445718 9229000 ~ 9231753 (-)
AMCG00017547 sh3rf1 coding downstream 492725 9164861 ~ 9184746 (-)
AMCG00017555 LOC106608544 coding upstream 807076 10487297 ~ 10496150 (-)
AMCG00017559 NA coding upstream 1267525 10947746 ~ 10948005 (-)
AMCG00017558 NA coding upstream 1267889 10948110 ~ 10949709 (-)
AMCG00017557 stim2 coding upstream 1613387 11293608 ~ 11315800 (-)
AMCG00017572 LOC108228807 coding upstream 1676584 11356805 ~ 11387412 (-)
G91300 NA non-coding downstream 1692 9675546 ~ 9675779 (-)
G91298 NA non-coding downstream 14683 9662564 ~ 9662788 (-)
G91297 NA non-coding downstream 44612 9632645 ~ 9632859 (-)
G91294 NA non-coding downstream 82309 9594930 ~ 9595162 (-)
G91064 NA non-coding downstream 1071845 8603621 ~ 8605626 (-)
G91311 NA non-coding upstream 617184 10297405 ~ 10297808 (-)
G91321 NA non-coding upstream 677179 10357400 ~ 10361148 (-)
G91354 NA non-coding upstream 1387492 11067713 ~ 11068015 (-)
G91355 NA non-coding upstream 1471157 11151378 ~ 11151698 (-)
G91359 NA non-coding upstream 1587885 11268106 ~ 11268595 (-)
G91119 NA other downstream 921564 8755288 ~ 8755907 (-)
AMCG00017531 NA other downstream 928728 8732760 ~ 8748743 (-)
AMCG00017520 NA other downstream 1162516 8473490 ~ 8514955 (-)
G90939 LOC105903575 other downstream 1680876 7992137 ~ 7996595 (-)
G90937 NA other downstream 1844879 7830885 ~ 7832592 (-)
AMCG00017556 NA other upstream 681079 10361300 ~ 10497104 (-)
AMCG00017563 NA other upstream 1823803 11504024 ~ 11506820 (-)
AMCG00017569 NA other upstream 2197139 11877360 ~ 11900600 (-)
AMCG00017582 NA other upstream 2627560 12307781 ~ 12322370 (-)
AMCG00017631 NA other upstream 4752937 14433158 ~ 14484818 (-)

Expression


Co-expression Network