G91339


Basic Information

Item Value
gene id G91339
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 10789598 ~ 10789889 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU113947
ttagtcagacattaaatgactacgcaggttagtatttatgtcaggtaacttctcgttatatatatatcagtctcatttacgtttaggtgccgtgaaagatcctatcattatttgttaccacaattttaatgattattattcaatgattaaggataggcagggccacctataatctggtgtctattaacttgtgtcaatttcagactaaacagttaaacaggaatgagaagatatttctcagcgttgacagattttatttctaaaattatcaacaaaacagtttaatgcaaca

Function

NR:

description
CCR4-NOT transcription complex subunit 10 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113947 True 292 lncRNA 0.32 1 10789598 10789889

Neighbor

gene id symbol gene type direction distance location
AMCG00017552 NA coding upstream 894165 9893228 ~ 9895433 (+)
AMCG00017553 NA coding upstream 1120622 9630401 ~ 9668976 (+)
AMCG00017551 NA coding upstream 1417403 9257206 ~ 9372195 (+)
AMCG00017545 NA coding upstream 1642259 9127763 ~ 9147339 (+)
AMCG00017544 NA coding upstream 1686395 9086577 ~ 9103203 (+)
AMCG00017560 NA coding downstream 600300 11390189 ~ 11402671 (+)
AMCG00017561 NA coding downstream 717987 11507876 ~ 11525014 (+)
AMCG00017562 fbxl5,LOC106674637 coding downstream 1077276 11867165 ~ 11879473 (+)
AMCG00017577 NA coding downstream 1234367 12024256 ~ 12024505 (+)
AMCG00017578 NA coding downstream 1234644 12024533 ~ 12029958 (+)
G91334 NA non-coding upstream 25262 10740103 ~ 10764336 (+)
G91329 NA non-coding upstream 221170 10568178 ~ 10568428 (+)
G91310 NA non-coding upstream 491790 10297402 ~ 10297808 (+)
G91307 NA non-coding upstream 622851 10166530 ~ 10166747 (+)
G91151 NA non-coding upstream 1948560 8838647 ~ 8841038 (+)
G91341 NA non-coding downstream 413 10790302 ~ 10790668 (+)
G91353 NA non-coding downstream 277824 11067713 ~ 11068015 (+)
G91361 NA non-coding downstream 497972 11287861 ~ 11288163 (+)
G91363 NA non-coding downstream 500399 11290288 ~ 11291576 (+)
G91386 LOC106577485 non-coding downstream 618405 11408294 ~ 11415102 (+)
G91281 LOC103376870 other upstream 1206318 9519773 ~ 9583280 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other upstream 2024695 8751713 ~ 8764903 (+)
AMCG00017526 paics,LOC107555752 other upstream 2088844 8687697 ~ 8700754 (+)
G90955 NA other upstream 2656744 8132368 ~ 8132854 (+)
AMCG00017508 NA other upstream 2975959 7806378 ~ 7813639 (+)
G91452 cc2d2a other downstream 1089725 11879614 ~ 11880499 (+)
AMCG00017600 NA other downstream 2407006 13196895 ~ 13259760 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other downstream 2991377 13781266 ~ 13830819 (+)
AMCG00017620 htra3,LOC106577909 other downstream 3235747 14025636 ~ 14039063 (+)
G92046 NA other downstream 4287436 15077325 ~ 15084278 (+)

Expression


Co-expression Network