G91371



Basic Information


Item Value
gene id G91371
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 11290328 ~ 11291234 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU113985
TGTGATATTTGAGGCACTGTATGTCTATTAGATGTCTTTAATGCCCTGCtgagtgattttattttcaaatttgggATGATCATGTCATCAAGATTTTGCATGTGCAAACAAGAACATAACCTTCCTTCTGGAAACATTAATCAATGAAATAACAGAGAAAAAGCTATACATTTTGACATGCTTGGAAGAGatctatttattcataaaatccataaaaatCTTTATGCCCATGACggcatgtattttatttatcctaGTTATCACAAGGAGCCAAAAGTCTTTCATGCATTAAAAcgttattttttctaaattatgGGTGATCTGAAGttagagggggaaaaaagtacaaataaaaaaaacggtTCCCTGAAGCACAATTCTCTCATTTACATCCTGTTTAAATAGAAGCACCTGCAGAAGCATTGCCTCCCACAGAAACTATGCAGAGGTGTTAGCATATCTCTGCCAAAACAGGATATAATCCCCAAGCCTGCTGGCCTCGCTGCCAAAGCAGTGCCTGAAAAGTAAACAATCCAAGATATCAGTGGGCACAGAAGACAAACAATCGAAGCACTAAATAAACAGGGACAGTCACATGACCTGGTGTTCAATACCCTGGGCAAAGATCCTGCAGTATGTATCCAAGGATAAGCCAGGTTCGTGaagtcagtcactcagtcttGCCATCAGACCCTTTCACAGATTAAatgaactaataataaaataccccGGAATGGACTGGttaaatcattgtatttttcaagcggaatcttttttttgtttgttctttgggGGGGTTAAATGTTTAAAGCCTTTGCAGGTTGATAGAGGAACTGTTAAAGCTCACATTTATAGAGGAAGCAAGAGCTTGTATCACTCTACGGACTGTAAAAGAGTAAGGTGCACC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU113985 True 907 lncRNA 0.38 1 11290328 11291234

Neighbor


gene id symbol gene type direction distance location
AMCG00017558 NA coding downstream 340619 10948110 ~ 10949709 (-)
AMCG00017559 NA coding downstream 342323 10947746 ~ 10948005 (-)
AMCG00017555 LOC106608544 coding downstream 794178 10487297 ~ 10496150 (-)
AMCG00017554 NA coding downstream 1743014 9495728 ~ 9547314 (-)
AMCG00017550 nwd2 coding downstream 1918249 9342114 ~ 9372079 (-)
AMCG00017557 stim2 coding upstream 2374 11293608 ~ 11315800 (-)
AMCG00017572 LOC108228807 coding upstream 65571 11356805 ~ 11387412 (-)
AMCG00017566 rbpj,LOC106577485 coding upstream 123094 11414328 ~ 11423945 (-)
AMCG00017571 NA coding upstream 239876 11531110 ~ 11536385 (-)
AMCG00017570 prdm5,LOC106560247 coding upstream 451250 11742484 ~ 11770097 (-)
G91362 NA non-coding downstream 2165 11287855 ~ 11288163 (-)
G91359 NA non-coding downstream 21733 11268106 ~ 11268595 (-)
G91355 NA non-coding downstream 138630 11151378 ~ 11151698 (-)
G91354 NA non-coding downstream 222313 11067713 ~ 11068015 (-)
G91321 NA non-coding downstream 929180 10357400 ~ 10361148 (-)
G91381 NA non-coding upstream 106286 11397520 ~ 11397731 (-)
G91466 NA non-coding upstream 536774 11828008 ~ 11829693 (-)
G91467 NA non-coding upstream 540199 11831433 ~ 11833898 (-)
G91539 NA non-coding upstream 1050208 12341442 ~ 12341735 (-)
G91553 NA non-coding upstream 1205057 12496291 ~ 12499947 (-)
AMCG00017556 NA other downstream 793224 10361300 ~ 10497104 (-)
G91119 NA other downstream 2534421 8755288 ~ 8755907 (-)
AMCG00017531 NA other downstream 2541585 8732760 ~ 8748743 (-)
AMCG00017520 NA other downstream 2775373 8473490 ~ 8514955 (-)
G90939 LOC105903575 other downstream 3293733 7992137 ~ 7996595 (-)
AMCG00017563 NA other upstream 212790 11504024 ~ 11506820 (-)
AMCG00017569 NA other upstream 586126 11877360 ~ 11900600 (-)
AMCG00017582 NA other upstream 1016547 12307781 ~ 12322370 (-)
AMCG00017631 NA other upstream 3141924 14433158 ~ 14484818 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other upstream 3468834 14760068 ~ 14764832 (-)

Expression



Co-expression Network