Gene
RNA
| Item | Value |
|---|---|
| gene id | G91387 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 11416521 ~ 11416740 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU114003 | True | 220 | lncRNA | 0.46 | 1 | 11416521 | 11416740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017560 | NA | coding | upstream | 13850 | 11390189 ~ 11402671 (+) |
| AMCG00017552 | NA | coding | upstream | 1521088 | 9893228 ~ 9895433 (+) |
| AMCG00017553 | NA | coding | upstream | 1747545 | 9630401 ~ 9668976 (+) |
| AMCG00017551 | NA | coding | upstream | 2044326 | 9257206 ~ 9372195 (+) |
| AMCG00017545 | NA | coding | upstream | 2269182 | 9127763 ~ 9147339 (+) |
| AMCG00017561 | NA | coding | downstream | 91136 | 11507876 ~ 11525014 (+) |
| AMCG00017562 | fbxl5,LOC106674637 | coding | downstream | 450425 | 11867165 ~ 11879473 (+) |
| AMCG00017577 | NA | coding | downstream | 607516 | 12024256 ~ 12024505 (+) |
| AMCG00017578 | NA | coding | downstream | 607793 | 12024533 ~ 12029958 (+) |
| AMCG00017575 | NA | coding | downstream | 682250 | 12098990 ~ 12118066 (+) |
| G91386 | LOC106577485 | non-coding | upstream | 1419 | 11408294 ~ 11415102 (+) |
| G91363 | NA | non-coding | upstream | 124945 | 11290288 ~ 11291576 (+) |
| G91361 | NA | non-coding | upstream | 128358 | 11287861 ~ 11288163 (+) |
| G91353 | NA | non-coding | upstream | 348506 | 11067713 ~ 11068015 (+) |
| G91341 | NA | non-coding | upstream | 625853 | 10790302 ~ 10790668 (+) |
| G91480 | LOC107549164,LOC106560248,LOC106584219 | non-coding | downstream | 518887 | 11935627 ~ 11935961 (+) |
| G91481 | NA | non-coding | downstream | 519361 | 11936101 ~ 11936339 (+) |
| G91490 | NA | non-coding | downstream | 558669 | 11975409 ~ 11975612 (+) |
| G91545 | NA | non-coding | downstream | 1019004 | 12435744 ~ 12435984 (+) |
| G91549 | NA | non-coding | downstream | 1073343 | 12490083 ~ 12490296 (+) |
| G91281 | LOC103376870 | other | upstream | 1833241 | 9519773 ~ 9583280 (+) |
| AMCG00017527 | tkfc,LOC107731922,LOC107095500 | other | upstream | 2651618 | 8751713 ~ 8764903 (+) |
| AMCG00017526 | paics,LOC107555752 | other | upstream | 2715767 | 8687697 ~ 8700754 (+) |
| G90955 | NA | other | upstream | 3283667 | 8132368 ~ 8132854 (+) |
| AMCG00017508 | NA | other | upstream | 3602882 | 7806378 ~ 7813639 (+) |
| G91452 | cc2d2a | other | downstream | 462874 | 11879614 ~ 11880499 (+) |
| AMCG00017600 | NA | other | downstream | 1780155 | 13196895 ~ 13259760 (+) |
| AMCG00017615 | sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 | other | downstream | 2364526 | 13781266 ~ 13830819 (+) |
| AMCG00017620 | htra3,LOC106577909 | other | downstream | 2608896 | 14025636 ~ 14039063 (+) |
| G92046 | NA | other | downstream | 3660585 | 15077325 ~ 15084278 (+) |
