Gene
RNA
| Item | Value |
|---|---|
| gene id | G91545 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 12435744 ~ 12435984 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU114194 | True | 241 | lncRNA | 0.51 | 1 | 12435744 | 12435984 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017585 | NA | coding | upstream | 37991 | 12393280 ~ 12397753 (+) |
| AMCG00017580 | rab28,LOC107717319 | coding | upstream | 257626 | 12173844 ~ 12178118 (+) |
| AMCG00017581 | rab28,LOC106600633 | coding | upstream | 277503 | 12148269 ~ 12158241 (+) |
| AMCG00017576 | LOC106589762 | coding | upstream | 304794 | 12129663 ~ 12130950 (+) |
| AMCG00017575 | NA | coding | upstream | 317678 | 12098990 ~ 12118066 (+) |
| AMCG00017583 | NA | coding | downstream | 36964 | 12472948 ~ 12489169 (+) |
| AMCG00017584 | wdr1,LOC106565198,LOC106583413 | coding | downstream | 70606 | 12506590 ~ 12521063 (+) |
| AMCG00017586 | NA | coding | downstream | 110385 | 12546369 ~ 12565088 (+) |
| AMCG00017592 | NA | coding | downstream | 276173 | 12712157 ~ 12717400 (+) |
| AMCG00017593 | NA | coding | downstream | 285257 | 12721241 ~ 12727616 (+) |
| G91490 | NA | non-coding | upstream | 460132 | 11975409 ~ 11975612 (+) |
| G91481 | NA | non-coding | upstream | 499405 | 11936101 ~ 11936339 (+) |
| G91480 | LOC107549164,LOC106560248,LOC106584219 | non-coding | upstream | 499783 | 11935627 ~ 11935961 (+) |
| G91387 | NA | non-coding | upstream | 1019004 | 11416521 ~ 11416740 (+) |
| G91386 | LOC106577485 | non-coding | upstream | 1020642 | 11408294 ~ 11415102 (+) |
| G91549 | NA | non-coding | downstream | 54099 | 12490083 ~ 12490296 (+) |
| G91597 | NA | non-coding | downstream | 271326 | 12707310 ~ 12710716 (+) |
| G91619 | NA | non-coding | downstream | 429203 | 12865187 ~ 12891356 (+) |
| G91649 | NA | non-coding | downstream | 623872 | 13059856 ~ 13060646 (+) |
| G91683 | NA | non-coding | downstream | 704678 | 13140662 ~ 13140878 (+) |
| G91452 | cc2d2a | other | upstream | 555245 | 11879614 ~ 11880499 (+) |
| G91281 | LOC103376870 | other | upstream | 2852464 | 9519773 ~ 9583280 (+) |
| AMCG00017527 | tkfc,LOC107731922,LOC107095500 | other | upstream | 3670841 | 8751713 ~ 8764903 (+) |
| AMCG00017526 | paics,LOC107555752 | other | upstream | 3734990 | 8687697 ~ 8700754 (+) |
| G90955 | NA | other | upstream | 4302890 | 8132368 ~ 8132854 (+) |
| AMCG00017600 | NA | other | downstream | 760911 | 13196895 ~ 13259760 (+) |
| AMCG00017615 | sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 | other | downstream | 1345282 | 13781266 ~ 13830819 (+) |
| AMCG00017620 | htra3,LOC106577909 | other | downstream | 1589652 | 14025636 ~ 14039063 (+) |
| G92046 | NA | other | downstream | 2641341 | 15077325 ~ 15084278 (+) |
| AMCG00017651 | NA | other | downstream | 2652148 | 15088132 ~ 15090829 (+) |
