Gene
RNA
| Item | Value |
|---|---|
| gene id | G91553 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 12496291 ~ 12499947 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU114204 | True | 385 | lncRNA | 0.40 | 2 | 12496291 | 12499947 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017579 | bod1l1 | coding | downstream | 399022 | 12092470 ~ 12097269 (-) |
| AMCG00017565 | NA | coding | downstream | 522607 | 11955414 ~ 11973684 (-) |
| AMCG00017568 | cpeb2 | coding | downstream | 557758 | 11933251 ~ 11938533 (-) |
| AMCG00017567 | LOC108240206 | coding | downstream | 588897 | 11904838 ~ 11907394 (-) |
| AMCG00017574 | NA | coding | downstream | 644677 | 11843481 ~ 11851614 (-) |
| AMCG00017587 | drd5 | coding | upstream | 164584 | 12664531 ~ 12665835 (-) |
| AMCG00017589 | otop1,LOC106583410 | coding | upstream | 171161 | 12671108 ~ 12677683 (-) |
| AMCG00017591 | NA | coding | upstream | 182479 | 12682426 ~ 12688515 (-) |
| AMCG00017588 | NA | coding | upstream | 204511 | 12704458 ~ 12710164 (-) |
| AMCG00017590 | NA | coding | upstream | 230084 | 12730031 ~ 12739099 (-) |
| G91539 | NA | non-coding | downstream | 154556 | 12341442 ~ 12341735 (-) |
| G91467 | NA | non-coding | downstream | 662393 | 11831433 ~ 11833898 (-) |
| G91466 | NA | non-coding | downstream | 666598 | 11828008 ~ 11829693 (-) |
| G91381 | NA | non-coding | downstream | 1098560 | 11397520 ~ 11397731 (-) |
| G91371 | NA | non-coding | downstream | 1205057 | 11290328 ~ 11291234 (-) |
| G91556 | wdr1,LOC107717326,LOC106583413 | non-coding | upstream | 6680 | 12506627 ~ 12509143 (-) |
| G91562 | wdr1,LOC106565198 | non-coding | upstream | 17133 | 12517080 ~ 12521214 (-) |
| G91576 | NA | non-coding | upstream | 156122 | 12656069 ~ 12656333 (-) |
| G91850 | NA | non-coding | upstream | 1544174 | 14044121 ~ 14044527 (-) |
| G92006 | NA | non-coding | upstream | 2300143 | 14800090 ~ 14800401 (-) |
| AMCG00017582 | NA | other | downstream | 173921 | 12307781 ~ 12322370 (-) |
| AMCG00017569 | NA | other | downstream | 595691 | 11877360 ~ 11900600 (-) |
| AMCG00017563 | NA | other | downstream | 989471 | 11504024 ~ 11506820 (-) |
| AMCG00017556 | NA | other | downstream | 1999187 | 10361300 ~ 10497104 (-) |
| G91119 | NA | other | downstream | 3740384 | 8755288 ~ 8755907 (-) |
| AMCG00017631 | NA | other | upstream | 1933211 | 14433158 ~ 14484818 (-) |
| AMCG00017638 | scoc,LOC103463814,LOC103132857 | other | upstream | 2260121 | 14760068 ~ 14764832 (-) |
| G92124 | LOC101154678 | other | upstream | 3367000 | 15866947 ~ 15867647 (-) |
| G92129 | NA | other | upstream | 3530455 | 16030402 ~ 16030905 (-) |
| AMCG00017663 | NA | other | upstream | 4887537 | 17387484 ~ 17395049 (-) |
