G91597


Basic Information

Item Value
gene id G91597
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 12707310 ~ 12710716 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU114261
TTGTCGTGTTTACGTTTCTTGCACTTCTTGCTCGTTGTCACATCTTCGAGGCCATGGCCATTTTCTGTCCCATTCTCGCCTTTAGCCTCATGCATTGGGACCTGGTCATCATCTTCAGCTTCCTCTTGGCTTTCCAGCctcaatgttttcttctctttcttgttctttttctgcctTTCTTCTTTACGCTCCCgcttgttctttttcttctcttttgacGGGGCCTTCTCCTCGGTCACAGAGGCCTGgtttttttcttcactctcATCTGGCTGACTGTTTGTGCACTTCTGGGGCTGGCTGGGCTCACTGCTTGTTGCTGTTGAAAAAATGTCCCACACCTGGTCTTGCAAAGCTTGGTTATTGAGCTTTAAACTGTTCTTCATCCAGTTCTggaattttccttttttccgaGGAACATTGTCGTAGGAGCTCACCTGCTGCAGTACCTCACGTAATTTTGGACTTATCCCTGGTTTATTCATTGCTTCGTGAATTTTCTGAATCCATTGCTGCTGCTTCACGTCTCCTTTGTTACTCTTGGCTTCATAGCCTTTCCCTCCATACTTTTGATCTTCAGTTATGCACTTGACATGATTTTTGTAATCATCACCCCAGAAGTCTTTACCACAGTCGATGCAGGACAAGCTCTGGCAGCTCCTACACACACTTACATGCTTGTCGACTTGGCCCTTCTTCAGAGACTCCCCACATGCATTGCAGGTGAAGAAAACCATACTGAAGACAAGTACGATGGAAAAGCACACCGATACTCCCTAGGACCCTAGAAAAGAAAACTaccacatcacacacacacacacacacaaattatatatatatgagagcgagagagagagagagtaacaCTAAGAGCGAAGATTTAAGGTAACATTGTAAAcggttattttgttttaacttttcaCTAAGTTCTGTGTTCTTACGATGCGAtagtaatttatattattaaaacgtAACACTTATTAATGTAAGACTTAAGTATGTCTACAAATTACAGAACAATACTGCATAAACGAACTAGATAAaagttgattattttaataataatgatctatTACACCGACCTGCAAACATTCAAATCTACCCCACGTGTGACCGGGCGGAAGTGTCGCACTGTTTACATCCGGTGGTGCCAGAGCGCCCGTGGAGAAGAGTTCCGCTGTTTAAACCCGTATCTTAAAAGACTATATATTACAGATTATATCCGCCTTAAAATATACATCGATCTCCCAAAATGAAGATGGCATGTGGAAATATATTCAGCTGAGCTACATCATTACGAATCATGTATTACTTCCACGGCAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114261 True 1326 lncRNA 0.42 5 12707310 12710716

Neighbor

gene id symbol gene type direction distance location
AMCG00017586 NA coding upstream 142222 12546369 ~ 12565088 (+)
AMCG00017584 wdr1,LOC106565198,LOC106583413 coding upstream 186247 12506590 ~ 12521063 (+)
AMCG00017583 NA coding upstream 218141 12472948 ~ 12489169 (+)
AMCG00017585 NA coding upstream 309557 12393280 ~ 12397753 (+)
AMCG00017580 rab28,LOC107717319 coding upstream 529192 12173844 ~ 12178118 (+)
AMCG00017592 NA coding downstream 1441 12712157 ~ 12717400 (+)
AMCG00017593 NA coding downstream 10525 12721241 ~ 12727616 (+)
AMCG00017596 msx1a,msx1,LOC107682425 coding downstream 153660 12864376 ~ 12865629 (+)
AMCG00017599 stk32b,stk32a,LOC108414397,LOC108278444 coding downstream 214134 12924850 ~ 12931836 (+)
AMCG00017597 NA coding downstream 240616 12951332 ~ 12970031 (+)
G91549 NA non-coding upstream 217014 12490083 ~ 12490296 (+)
G91545 NA non-coding upstream 271326 12435744 ~ 12435984 (+)
G91490 NA non-coding upstream 731698 11975409 ~ 11975612 (+)
G91481 NA non-coding upstream 770971 11936101 ~ 11936339 (+)
G91480 LOC107549164,LOC106560248,LOC106584219 non-coding upstream 771349 11935627 ~ 11935961 (+)
G91619 NA non-coding downstream 154471 12865187 ~ 12891356 (+)
G91649 NA non-coding downstream 349140 13059856 ~ 13060646 (+)
G91683 NA non-coding downstream 429946 13140662 ~ 13140878 (+)
G91726 NA non-coding downstream 811925 13522641 ~ 13526149 (+)
G91727 NA non-coding downstream 818065 13528781 ~ 13533210 (+)
G91452 cc2d2a other upstream 826811 11879614 ~ 11880499 (+)
G91281 LOC103376870 other upstream 3124030 9519773 ~ 9583280 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other upstream 3942407 8751713 ~ 8764903 (+)
AMCG00017526 paics,LOC107555752 other upstream 4006556 8687697 ~ 8700754 (+)
G90955 NA other upstream 4574456 8132368 ~ 8132854 (+)
AMCG00017600 NA other downstream 486179 13196895 ~ 13259760 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other downstream 1070550 13781266 ~ 13830819 (+)
AMCG00017620 htra3,LOC106577909 other downstream 1314920 14025636 ~ 14039063 (+)
G92046 NA other downstream 2366609 15077325 ~ 15084278 (+)
AMCG00017651 NA other downstream 2377416 15088132 ~ 15090829 (+)

Expression


Co-expression Network