Gene
RNA
| Item | Value |
|---|---|
| gene id | G91649 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 13059856 ~ 13060646 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU114318 | True | 468 | lncRNA | 0.39 | 2 | 13059856 | 13060646 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017597 | NA | coding | upstream | 89825 | 12951332 ~ 12970031 (+) |
| AMCG00017599 | stk32b,stk32a,LOC108414397,LOC108278444 | coding | upstream | 128020 | 12924850 ~ 12931836 (+) |
| AMCG00017596 | msx1a,msx1,LOC107682425 | coding | upstream | 194227 | 12864376 ~ 12865629 (+) |
| AMCG00017593 | NA | coding | upstream | 332240 | 12721241 ~ 12727616 (+) |
| AMCG00017592 | NA | coding | upstream | 342456 | 12712157 ~ 12717400 (+) |
| AMCG00017595 | NA | coding | downstream | 1095 | 13061741 ~ 13078027 (+) |
| AMCG00017610 | NA | coding | downstream | 310969 | 13371615 ~ 13383451 (+) |
| AMCG00017608 | NA | coding | downstream | 359150 | 13419796 ~ 13422446 (+) |
| AMCG00017609 | NA | coding | downstream | 367502 | 13428148 ~ 13429174 (+) |
| AMCG00017611 | NA | coding | downstream | 385855 | 13446501 ~ 13474811 (+) |
| G91619 | NA | non-coding | upstream | 168500 | 12865187 ~ 12891356 (+) |
| G91597 | NA | non-coding | upstream | 349140 | 12707310 ~ 12710716 (+) |
| G91549 | NA | non-coding | upstream | 569560 | 12490083 ~ 12490296 (+) |
| G91545 | NA | non-coding | upstream | 623872 | 12435744 ~ 12435984 (+) |
| G91490 | NA | non-coding | upstream | 1084244 | 11975409 ~ 11975612 (+) |
| G91683 | NA | non-coding | downstream | 80016 | 13140662 ~ 13140878 (+) |
| G91726 | NA | non-coding | downstream | 461995 | 13522641 ~ 13526149 (+) |
| G91727 | NA | non-coding | downstream | 468135 | 13528781 ~ 13533210 (+) |
| G91740 | NA | non-coding | downstream | 797571 | 13858217 ~ 13913757 (+) |
| G91849 | NA | non-coding | downstream | 983438 | 14044084 ~ 14044528 (+) |
| G91452 | cc2d2a | other | upstream | 1179357 | 11879614 ~ 11880499 (+) |
| G91281 | LOC103376870 | other | upstream | 3476576 | 9519773 ~ 9583280 (+) |
| AMCG00017527 | tkfc,LOC107731922,LOC107095500 | other | upstream | 4294953 | 8751713 ~ 8764903 (+) |
| AMCG00017526 | paics,LOC107555752 | other | upstream | 4359102 | 8687697 ~ 8700754 (+) |
| G90955 | NA | other | upstream | 4927002 | 8132368 ~ 8132854 (+) |
| AMCG00017600 | NA | other | downstream | 136249 | 13196895 ~ 13259760 (+) |
| AMCG00017615 | sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 | other | downstream | 720620 | 13781266 ~ 13830819 (+) |
| AMCG00017620 | htra3,LOC106577909 | other | downstream | 964990 | 14025636 ~ 14039063 (+) |
| G92046 | NA | other | downstream | 2016679 | 15077325 ~ 15084278 (+) |
| AMCG00017651 | NA | other | downstream | 2027486 | 15088132 ~ 15090829 (+) |
