G91726



Basic Information


Item Value
gene id G91726
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 13522641 ~ 13526149 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU114421
CTGCCTCTTTCAGAAGCCCCAGCAGAACCTCTTGAGACAAACCGCTCCTCGTTCAGCTCCAGACCTGCAGCAGTAAAGATGAAATCCTCCCAGCTGGTCATCGCAGCTCTTCTCCTGGCTGTCCTGTGCTCTTCCACTCTTGGCCAAAATTCAAATTTACCATCGGAATGCTGTTTCTCCTATTATCCCAAGCTAATTCCTAAAAGGTTGATAGAGCAGTATGAGAATACCCGCTCTGACTGCTCACAGCCTGGTGTGATtttgATCTCACTGAAAAAGATTCGCATCTGTGCAAATCCCAGTGTGCAATGGGTGAAGGATATCATGAACAGACTGAATGAAAAACTTCTCCAGTAATTTCCAATGGTACTTTAAACTTTTGATACAAATGTACCTGCAAAGCTATGAATTTAATTGCCTGATCAGCACCTAACTGAAAGAACTAACTGTGAACTGTGTTTCTATCCAGTAATACTTTCCTTTCTCAAATTCAGCTTTGATTATATACAGTTTTACAAATATAGCCAATAACTGAGTCATTATTTCAgccattattttgaatgtattattattattttcttttcatattgatttaaagAAACAACCTAGCTGCACTTTATATTATAATCTCTTGTCATATAATTCAGCCCAGATTTCTCCCTGTGTTGTCTTTTGTGAGCTGTTGACAGTATGTGTCCATTATCCGAAGCAGGGCTCAATCTGGTGGAAACCACGGCTCATTGTCAGTGCCAAATAAAGCTCTTTCATAAACAGTGACAGGAAGATGGTTTTTACTGTCCCTTGCCTCTTCTTCCTCTCAATGTCTACAGTGTTATTCACCCACACTTCAAAACTTAATGCCAGTTCAACCAGACTTATTTGCATCTGCACTCCTGCACTGTGttcattaaacaaatgcatgaattTGAAGTACTCTTCAAGTCCTGTTCAATATATTCCAAACTTCCCAAAATGCTACTGTTTGTTTGAAGATTTGTTTTGCAGGCTAATTAATGTTTGCTTGTGCCCAAACCCTGCTATtaatattcttgaaatatatgTTTCTATACGGTAGGCCTATTTGAACGTGAAAGAGATCTGTAAATCTGTTCAGGTTGTCTTTCATGAGACAGATGccattctgaaattgtagaaaaATCctaatagaaaaaacaaactatgaGTTAGTTAGCTTGCACTTCAATGCAATTGTCTAtatgttgtattattgtaaaaacagcagaagaaaattgtgtgactgtgtaatttttaaataaataacacattttgtaattCCAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU114421 True 1299 lncRNA 0.37 4 13522641 13526149

Neighbor


gene id symbol gene type direction distance location
AMCG00017613 LOC106577489 coding upstream 4474 13501947 ~ 13518167 (+)
AMCG00017611 NA coding upstream 47830 13446501 ~ 13474811 (+)
AMCG00017609 NA coding upstream 93467 13428148 ~ 13429174 (+)
AMCG00017608 NA coding upstream 100195 13419796 ~ 13422446 (+)
AMCG00017610 NA coding upstream 139190 13371615 ~ 13383451 (+)
AMCG00017612 tada2b,LOC107656199,LOC107739399,LOC107653294,LOC107722428 coding downstream 16312 13542461 ~ 13548563 (+)
AMCG00017619 NA coding downstream 467442 13993591 ~ 14009256 (+)
AMCG00017618 NA coding downstream 542625 14068774 ~ 14084436 (+)
AMCG00017626 gpr78,LOC106608662,LOC105020663 coding downstream 603484 14129633 ~ 14132463 (+)
AMCG00017621 NA coding downstream 609451 14135600 ~ 14151779 (+)
G91683 NA non-coding upstream 381763 13140662 ~ 13140878 (+)
G91649 NA non-coding upstream 461995 13059856 ~ 13060646 (+)
G91619 NA non-coding upstream 631285 12865187 ~ 12891356 (+)
G91597 NA non-coding upstream 811925 12707310 ~ 12710716 (+)
G91549 NA non-coding upstream 1032345 12490083 ~ 12490296 (+)
G91727 NA non-coding downstream 2632 13528781 ~ 13533210 (+)
G91740 NA non-coding downstream 332068 13858217 ~ 13913757 (+)
G91849 NA non-coding downstream 517935 14044084 ~ 14044528 (+)
G91931 NA non-coding downstream 992083 14518232 ~ 14539104 (+)
G92005 NA non-coding downstream 1273942 14800091 ~ 14800376 (+)
AMCG00017600 NA other upstream 262881 13196895 ~ 13259760 (+)
G91452 cc2d2a other upstream 1642142 11879614 ~ 11880499 (+)
G91281 LOC103376870 other upstream 3939361 9519773 ~ 9583280 (+)
AMCG00017527 tkfc,LOC107731922,LOC107095500 other upstream 4757738 8751713 ~ 8764903 (+)
AMCG00017526 paics,LOC107555752 other upstream 4821887 8687697 ~ 8700754 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other downstream 255117 13781266 ~ 13830819 (+)
AMCG00017620 htra3,LOC106577909 other downstream 499487 14025636 ~ 14039063 (+)
G92046 NA other downstream 1551176 15077325 ~ 15084278 (+)
AMCG00017651 NA other downstream 1561983 15088132 ~ 15090829 (+)
AMCG00017652 NA other downstream 1567042 15093191 ~ 15106835 (+)

Expression



Co-expression Network