G92005


Basic Information

Item Value
gene id G92005
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14800091 ~ 14800376 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU114761
ctcgattggattgagatctggggaatttggaggccaagtcaacaccttgaactcatgattcatcagaccaggccaccttcttccattgctccgtggtccagttctgatgctcacgtgcccattgtaggcgctttcggcagtggacaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattcactttttcagcaatctgagctacagtagctcgtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114761 True 286 lncRNA 0.52 1 14800091 14800376

Neighbor

gene id symbol gene type direction distance location
AMCG00017636 NA coding upstream 35264 14748681 ~ 14764827 (+)
AMCG00017637 NA coding upstream 53862 14725976 ~ 14746229 (+)
AMCG00017628 NA coding upstream 326731 14467590 ~ 14473360 (+)
AMCG00017621 NA coding upstream 648312 14135600 ~ 14151779 (+)
AMCG00017626 gpr78,LOC106608662,LOC105020663 coding upstream 667628 14129633 ~ 14132463 (+)
AMCG00017640 maml3,LOC107712021,LOC107671314 coding downstream 24158 14824534 ~ 14825214 (+)
AMCG00017641 NA coding downstream 121886 14922262 ~ 14931595 (+)
AMCG00017649 NA coding downstream 180188 14980564 ~ 14996066 (+)
AMCG00017642 setd7 coding downstream 221355 15021731 ~ 15033505 (+)
AMCG00017644 NA coding downstream 236929 15037305 ~ 15042799 (+)
G91931 NA non-coding upstream 260987 14518232 ~ 14539104 (+)
G91849 NA non-coding upstream 755563 14044084 ~ 14044528 (+)
G91740 NA non-coding upstream 886334 13858217 ~ 13913757 (+)
G91727 NA non-coding upstream 1266881 13528781 ~ 13533210 (+)
G91726 NA non-coding upstream 1273942 13522641 ~ 13526149 (+)
G92016 NA non-coding downstream 143007 14943383 ~ 15036381 (+)
G92038 NA non-coding downstream 261921 15062297 ~ 15085398 (+)
G92039 LOC107556532,LOC102237872,LOC107674234,LOC107737080 non-coding downstream 265761 15066137 ~ 15067818 (+)
G92059 NA non-coding downstream 361954 15162330 ~ 15162692 (+)
G92095 NA non-coding downstream 727185 15527561 ~ 15527878 (+)
AMCG00017620 htra3,LOC106577909 other upstream 761028 14025636 ~ 14039063 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other upstream 969272 13781266 ~ 13830819 (+)
AMCG00017600 NA other upstream 1540331 13196895 ~ 13259760 (+)
G91452 cc2d2a other upstream 2919592 11879614 ~ 11880499 (+)
G91281 LOC103376870 other upstream 5216811 9519773 ~ 9583280 (+)
G92046 NA other downstream 276949 15077325 ~ 15084278 (+)
AMCG00017651 NA other downstream 287756 15088132 ~ 15090829 (+)
AMCG00017652 NA other downstream 292815 15093191 ~ 15106835 (+)
AMCG00017650 NA other downstream 309046 15109422 ~ 15116031 (+)
G92123 LOC101154678 other downstream 1066655 15867031 ~ 15867634 (+)

Expression


Co-expression Network