G92016


Basic Information

Item Value
gene id G92016
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 14943383 ~ 15036381 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU114777
AAGGAAAACACTAGAAATACTTttgcatttacttaattttgtCTCCACAAAAGTAGCAATGAAAATTTGTAGTTctaatgttttcctttcctgAGCTGTATGATAAGTTTGTAGGcaagtaattaaaacacataagTAGTCTACTATATAGGAAAGTGACGATTTGTATCAGATGTCTGTGATATAATAGACAAACCTGGAATGCTATACAGAGGAATTTTGTATCGTATGTTTTAGAATTAGAATATGTGCACTGAGAGAATTACAGTTTGGTATTTAAGAGTTCTgagaatacatgttttacagaaTTGAATTTAAAGACGCCAAAGTGAGGACAGGTAGAAGTAACTGATTTCATAAGCACAGGGAAACCGTTGTTGTTCatgtttcaaatacattaaaaatgtgtaatgacTGACACGCACACAAGCTAACATTTCCTAGAGCAGGATTAATGCAGTGTTACACTATAATTTTAAACCATCAGGCAGGGTACTGATTTTCATCAAATGTCAGGATTAAATCAATTATAGTTTACAGGTACAGTAAGAGTAAGGATTCACTGAGTCAGTAGTGATCTAGCTTTCGTATTCAACTGCAGATTTCAGTGGCACTCTGAGATCTGTTGAGTTGCATCCCCATCACTCCAGCCCATAGTAGGAAATCTAAGCATCTCCAAGGAAGGGTTTGTTGCCATGTTTTCAGGCATTCATAGCCTTAGATCTGTGGATTATTTTCTGCACATGATCAATTGAGCAGGTGAGCCACTGTGGCGAATGTTTACAAGAAGCTGTTTGCAGAGTGTTTGTGTATTATAGGTTTTGTcgaatgtagttttttttaggTGTGTGTAGGAATGCAACTTTGAAAATTGatgaaaaaatgtgaaaatgacgACAGCAAGCCTTTATACTCCTAAAGACTTATGAGAGGCTTCTCTTGTACTGtataccaataaataataaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114777 True 967 lncRNA 0.35 2 14943383 15036381

Neighbor

gene id symbol gene type direction distance location
AMCG00017641 NA coding upstream 11788 14922262 ~ 14931595 (+)
AMCG00017640 maml3,LOC107712021,LOC107671314 coding upstream 118169 14824534 ~ 14825214 (+)
AMCG00017636 NA coding upstream 178556 14748681 ~ 14764827 (+)
AMCG00017637 NA coding upstream 197154 14725976 ~ 14746229 (+)
AMCG00017628 NA coding upstream 470023 14467590 ~ 14473360 (+)
AMCG00017644 NA coding downstream 924 15037305 ~ 15042799 (+)
AMCG00017643 NA coding downstream 16985 15053366 ~ 15062281 (+)
AMCG00017653 NA coding downstream 95042 15131423 ~ 15156693 (+)
AMCG00017655 NA coding downstream 157321 15193702 ~ 15194164 (+)
AMCG00017654 NA coding downstream 171228 15207609 ~ 15212259 (+)
G92005 NA non-coding upstream 143007 14800091 ~ 14800376 (+)
G91931 NA non-coding upstream 404279 14518232 ~ 14539104 (+)
G91849 NA non-coding upstream 898855 14044084 ~ 14044528 (+)
G91740 NA non-coding upstream 1029626 13858217 ~ 13913757 (+)
G91727 NA non-coding upstream 1410173 13528781 ~ 13533210 (+)
G92038 NA non-coding downstream 25916 15062297 ~ 15085398 (+)
G92039 LOC107556532,LOC102237872,LOC107674234,LOC107737080 non-coding downstream 29756 15066137 ~ 15067818 (+)
G92059 NA non-coding downstream 125949 15162330 ~ 15162692 (+)
G92095 NA non-coding downstream 491180 15527561 ~ 15527878 (+)
G92133 NA non-coding downstream 1130261 16166642 ~ 16182070 (+)
AMCG00017620 htra3,LOC106577909 other upstream 904320 14025636 ~ 14039063 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other upstream 1112564 13781266 ~ 13830819 (+)
AMCG00017600 NA other upstream 1683623 13196895 ~ 13259760 (+)
G91452 cc2d2a other upstream 3062884 11879614 ~ 11880499 (+)
G91281 LOC103376870 other upstream 5360103 9519773 ~ 9583280 (+)
G92046 NA other downstream 40944 15077325 ~ 15084278 (+)
AMCG00017651 NA other downstream 51751 15088132 ~ 15090829 (+)
AMCG00017652 NA other downstream 56810 15093191 ~ 15106835 (+)
AMCG00017650 NA other downstream 73041 15109422 ~ 15116031 (+)
G92123 LOC101154678 other downstream 830650 15867031 ~ 15867634 (+)

Expression


Co-expression Network