G92038


Basic Information

Item Value
gene id G92038
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 15062297 ~ 15085398 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU114805
agttttattGCATTGTATATTTGGTACCTCTTATGTGTTTGACAACAAGGGTATTAACTTTACAACTGAAAGAAAGAAGCTGATCTGGTtctgaaaaaaaagtaattggcCCCCATTCTGAAAAGGTACAAAGTCTGGGGCTTGTCTGAAACTGCTGAACGAGAAATATTCTCTTTTTAGAAAGACAGGGCTTCAagtattacaaaagaaaaaaaaatctttacgCTGTGGAAAATATCCAGAGGTATCATTAGATTAATATGCAGACGATACATCTGCACACATCTGGTGAGGACAGTCTGCAAAGGAACATGACTGCCAATCCTTTTTTTGACAACTAAAAACTATCAAAAAAAAGGAACAGTTCTCCTCCTGAGCAGTAAATATATGTTACCATTTATTCTGTGTGTATgcatgggtgtgtgtggggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGTCTCAAATAATTCAATATGGTTGACAAATGCCTGCTTTTTAAACTAAGATATCAGCTGATGACTAATATATTTGATAAAATTCCATCTCTTTTGAATCTGACAAACAGCGAAAAAGAAACCGTAATATACTGTGATTCTGAAATTGCTCAAAAGATGCAGTTTTATCATACACCACCCATTTCACTGTAACCTTAAAAAGAAGGCAAAGCAATGCATTTGCCACTCATACTGTACTCCAGGTAACCATTTACCTCCATTATCTGTGGTAAACATTATCTTTTTAGCTTCCTATGGCCCTCTGTGTAGTTCCTGCAGCACAGCTTATCAATtcgtttcatttcatttttcttttttaatggtttgtgCTCAGAATAGGAATCCAGTGCTAAGGAGTATGAACTGCTCTCCAAGATTAAACTGATCTCCTTCTCAGTTTAGCAGTGTTTTTGGCACGCACCTACCCTGTTATTTGTAACAgcctattattttttattattctttataaattactttaaaaacatggGAAGTAGATATTAGGATACAGTAAGCCTAATAGAACTGCTAATACCTCTTAGAATAACCCGTTGCTATTTGTGTCCTGATTatgttatcatttttatttttgtttagaagTAGTctgcaagattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaATAAAGATTT

Function

NR:

description
PREDICTED: syntaxin-6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114805 True 1161 lncRNA 0.34 2 15062297 15085398

Neighbor

gene id symbol gene type direction distance location
AMCG00017643 NA coding upstream 16 15053366 ~ 15062281 (+)
AMCG00017644 NA coding upstream 19498 15037305 ~ 15042799 (+)
AMCG00017642 setd7 coding upstream 28792 15021731 ~ 15033505 (+)
AMCG00017649 NA coding upstream 66231 14980564 ~ 14996066 (+)
AMCG00017641 NA coding upstream 130702 14922262 ~ 14931595 (+)
AMCG00017653 NA coding downstream 46025 15131423 ~ 15156693 (+)
AMCG00017655 NA coding downstream 108304 15193702 ~ 15194164 (+)
AMCG00017654 NA coding downstream 122211 15207609 ~ 15212259 (+)
AMCG00017657 slc7a11,LOC107740166,LOC107593222,LOC107680987 coding downstream 514021 15599419 ~ 15605110 (+)
AMCG00017658 NA coding downstream 524585 15609983 ~ 15794447 (+)
G92016 NA non-coding upstream 25916 14943383 ~ 15036381 (+)
G92005 NA non-coding upstream 261921 14800091 ~ 14800376 (+)
G91931 NA non-coding upstream 523193 14518232 ~ 14539104 (+)
G91849 NA non-coding upstream 1017769 14044084 ~ 14044528 (+)
G91740 NA non-coding upstream 1148540 13858217 ~ 13913757 (+)
G92059 NA non-coding downstream 76932 15162330 ~ 15162692 (+)
G92095 NA non-coding downstream 442163 15527561 ~ 15527878 (+)
G92133 NA non-coding downstream 1081244 16166642 ~ 16182070 (+)
G92145 NA non-coding downstream 1229656 16315054 ~ 16315523 (+)
G92147 LOC102215562 non-coding downstream 1345054 16430452 ~ 16430712 (+)
AMCG00017620 htra3,LOC106577909 other upstream 1023234 14025636 ~ 14039063 (+)
AMCG00017615 sorcs2,LOC106577493,LOC107590992,LOC107656200,LOC107722411 other upstream 1231478 13781266 ~ 13830819 (+)
AMCG00017600 NA other upstream 1802537 13196895 ~ 13259760 (+)
G91452 cc2d2a other upstream 3181798 11879614 ~ 11880499 (+)
G91281 LOC103376870 other upstream 5479017 9519773 ~ 9583280 (+)
AMCG00017651 NA other downstream 2734 15088132 ~ 15090829 (+)
AMCG00017652 NA other downstream 7793 15093191 ~ 15106835 (+)
AMCG00017650 NA other downstream 24024 15109422 ~ 15116031 (+)
G92123 LOC101154678 other downstream 781633 15867031 ~ 15867634 (+)
G92130 LOC101154678 other downstream 1049627 16135025 ~ 16135316 (+)

Expression


Co-expression Network