G92050


Basic Information

Item Value
gene id G92050
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 15055292 ~ 15056623 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU114819
TGTTGACAAAGGAGGCGGAATAGTCCCAGATGCCGCAGTTGAGGCCGGCGGAGTGCTCCTGCAGCTCATACAATATCTCCTCCATCTCAAAGGAGGCCAGGATGTTCTctatgagcacagtggcctttATACTGCCCACTGGCAAACCCAGCTGTGCGGAGggccacaacacacacacacagcataatgccaacaacagcaacaatgtCATGAAGATAGAGTGAAACTGAGAAGCTGGTTTGATTAttacaaacaatattaatagAAGTGATGGCATGTCTATAATAAATAAGAGCTTCGCATTTAAACTAAGTAACATCAATGTATTTTCACTATATTTAAAACTACAAAGAGATTTATATTAATACAGAGCAGAtggtaaccccccccccccatactTGGATTGGGTGAGAGGATAAGCTTTTCTCAGCTggaaacatgaaaacacaatcaTGTTTCTATAGCTACAGACTTCAAGAACATTTACATTCAACCATTATACACACTCAAGATATAAACAGGACAAGAATCAATTTATTCTGTACTGGTAACTTTCTCCCACCTTTTGTTCAGTCCAAATGAATATGTTGTTCCACAGTCTTGCTTCAAGATGGCTTTCAATCTAAATTATAAAAAACTGAAGGCAGTATAAAATTGCACTATCGCTGGGAGTGACACTCAAGTGTCCGCAACTGTCATATTATCAGCAAATGCAATCTAAACAAATGCAGACTAATGTAatgaaagatttatttaaatgcttttaaattctTAACTGTCAAAACTCAGTTCTATCAGTtttatgagaagaaaaaaagacaggaagtTCACATTTCTTATATGATATTAAACattgcacacattttttttaaatgtatgaaaaatctTTGTATAGTTAACTTTTTTAtccattttatgattttttttaaattctgcagcACCCTGACATGCTtttgcataatacatttaagttgattgattgattgattgattgattgattgactgattagTGATGCTAGGGCTTAATTAGGGacaagaaacacaaactgaTTTAAAAGGCAATCTGCAGAAAGCTTGACATTGGTCATTCATAGTGTAGGACTTGAATGCAAGTGCAAGTAgtccttgtttaaaaaaaacaccaacaacaataCCTTGGATAGATAGAAAAACGGCccacttttgttttcaaacagcaGCTTTCCATTATGGAACATTAATAATCCAAAATCAAACAAGGGGCCGGGAACCTCTTTGCCGTTGACCTGTAAAGACACACAGATGGGAATGGCAGAACATTACGGAAGCTGTACTGCAGATCCAGTTTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114819 True 1332 lncRNA 0.37 1 15055292 15056623

Neighbor

gene id symbol gene type direction distance location
AMCG00017645 rab33b,LOC102236194,LOC106911658,LOC101473034,LOC100689790,LOC102313972 coding downstream 2629 15043670 ~ 15052663 (-)
AMCG00017646 NA coding downstream 42524 15003446 ~ 15012768 (-)
AMCG00017639 grk4 coding downstream 379217 14664881 ~ 14676075 (-)
AMCG00017632 htt coding downstream 397804 14614561 ~ 14657488 (-)
AMCG00017634 NA coding downstream 442697 14608910 ~ 14612595 (-)
AMCG00017647 LOC108434806,LOC107737080,LOC105908469,LOC107712022 coding upstream 6804 15063427 ~ 15074519 (-)
AMCG00017648 naa15,LOC105908469,LOC108263533,LOC108434806 coding upstream 19200 15075823 ~ 15080306 (-)
AMCG00017660 tada2b coding upstream 156874 15213497 ~ 15213745 (-)
AMCG00017659 NA coding upstream 166879 15223502 ~ 15234769 (-)
AMCG00017661 pcdh10,pcdh10a,LOC106604685,LOC104931883 coding upstream 1729045 16785668 ~ 16797841 (-)
G92049 NA non-coding downstream 608 15054463 ~ 15054684 (-)
G92024 NA non-coding downstream 129332 14924393 ~ 14925960 (-)
G92006 NA non-coding downstream 254891 14800090 ~ 14800401 (-)
G91850 NA non-coding downstream 1010765 14044121 ~ 14044527 (-)
G91576 NA non-coding downstream 2398959 12656069 ~ 12656333 (-)
G92051 NA non-coding upstream 320 15056943 ~ 15057146 (-)
G92067 NA non-coding upstream 87912 15144535 ~ 15144735 (-)
G92069 NA non-coding upstream 105695 15162318 ~ 15162712 (-)
G92093 NA non-coding upstream 428634 15485257 ~ 15485762 (-)
G92132 LOC104962440 non-coding upstream 1078757 16135380 ~ 16135707 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other downstream 290460 14760068 ~ 14764832 (-)
AMCG00017631 NA other downstream 570474 14433158 ~ 14484818 (-)
AMCG00017582 NA other downstream 2732922 12307781 ~ 12322370 (-)
AMCG00017569 NA other downstream 3154692 11877360 ~ 11900600 (-)
AMCG00017563 NA other downstream 3548472 11504024 ~ 11506820 (-)
G92124 LOC101154678 other upstream 810324 15866947 ~ 15867647 (-)
G92129 NA other upstream 973779 16030402 ~ 16030905 (-)
AMCG00017663 NA other upstream 2330861 17387484 ~ 17395049 (-)
AMCG00017665 NA other upstream 2411982 17468605 ~ 17487497 (-)
AMCG00017675 NA other upstream 2725025 17781648 ~ 17789749 (-)

Expression


Co-expression Network