G92059


Basic Information

Item Value
gene id G92059
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 15162330 ~ 15162692 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU114831
aaagatctaggagtctatgtggactcctcactttctccatccaagcaatgtggggaagcaataaaaaaggcaaacacaatgctagggtatattgtcaaaagtgtagaatttaaaacaagggcagtaatgttcagactgtacaatgcactagttagagctcatctggatactgtgtacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactacgtggggacttgattcaagtcttcaaaatcatgaaaggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114831 True 363 lncRNA 0.44 1 15162330 15162692

Neighbor

gene id symbol gene type direction distance location
AMCG00017653 NA coding upstream 5637 15131423 ~ 15156693 (+)
AMCG00017643 NA coding upstream 100049 15053366 ~ 15062281 (+)
AMCG00017644 NA coding upstream 119531 15037305 ~ 15042799 (+)
AMCG00017642 setd7 coding upstream 128825 15021731 ~ 15033505 (+)
AMCG00017649 NA coding upstream 166264 14980564 ~ 14996066 (+)
AMCG00017655 NA coding downstream 31010 15193702 ~ 15194164 (+)
AMCG00017654 NA coding downstream 44917 15207609 ~ 15212259 (+)
AMCG00017657 slc7a11,LOC107740166,LOC107593222,LOC107680987 coding downstream 436727 15599419 ~ 15605110 (+)
AMCG00017658 NA coding downstream 447291 15609983 ~ 15794447 (+)
AMCG00017656 NA coding downstream 666237 15828929 ~ 15835050 (+)
G92038 NA non-coding upstream 76932 15062297 ~ 15085398 (+)
G92039 LOC107556532,LOC102237872,LOC107674234,LOC107737080 non-coding upstream 94512 15066137 ~ 15067818 (+)
G92016 NA non-coding upstream 125949 14943383 ~ 15036381 (+)
G92005 NA non-coding upstream 361954 14800091 ~ 14800376 (+)
G91931 NA non-coding upstream 623226 14518232 ~ 14539104 (+)
G92095 NA non-coding downstream 364869 15527561 ~ 15527878 (+)
G92133 NA non-coding downstream 1003950 16166642 ~ 16182070 (+)
G92145 NA non-coding downstream 1152362 16315054 ~ 16315523 (+)
G92147 LOC102215562 non-coding downstream 1267760 16430452 ~ 16430712 (+)
G92151 NA non-coding downstream 1440959 16603651 ~ 16603919 (+)
AMCG00017650 NA other upstream 46299 15109422 ~ 15116031 (+)
AMCG00017652 NA other upstream 55495 15093191 ~ 15106835 (+)
AMCG00017651 NA other upstream 71501 15088132 ~ 15090829 (+)
G92046 NA other upstream 78052 15077325 ~ 15084278 (+)
AMCG00017620 htra3,LOC106577909 other upstream 1123267 14025636 ~ 14039063 (+)
G92123 LOC101154678 other downstream 704339 15867031 ~ 15867634 (+)
G92130 LOC101154678 other downstream 972333 16135025 ~ 16135316 (+)
AMCG00017668 NA other downstream 2438843 17601535 ~ 17620033 (+)
AMCG00017674 rnf103,LOC107722440 other downstream 2536231 17698923 ~ 17723950 (+)
G92538 NA other downstream 3910546 19073238 ~ 19073662 (+)

Expression


Co-expression Network