G92123 (LOC101154678)


Basic Information

Item Value
gene id G92123
gene name LOC101154678
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 15867031 ~ 15867634 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU114906
caggcgggctgtcatgtgccttttactgaggagtggcttccgtctggccaccctaccatacaggcctgattggtggagtgctgcagagatggttgttcttctggaaggttctcctctctccacagagacatgctggagctctgtcagagtgaccatcgggttcttggtcacctccctgacgaaggcccttctcccccaatcgctcagtttggccgggcggccagctctaggaagagtcctggtggttccaaacttcttccatttatggatgatggaggccactgtgctcattgggaccttcaatgctgcagaaatgtttttgtacCCTTCCCccgatctgtgcctcgatacaatcctgtctcagcggtctacagacaattccttggacttcatggcttggtttgtgctctgacatgcactgttaactgtgggaccttatatagacaagtgtgtgcctttccaaatcatgtccaatcaactgaatttaccacaggtggactccaatcaagttgtagaaacatctcaaggatgatcagtggaaacaggatacacctgagctcaattttgagtgtcatggcaaaggctgtgaatacttatgtacatg

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114906 True 604 TUCP 0.50 1 15867031 15867634

Neighbor

gene id symbol gene type direction distance location
AMCG00017656 NA coding upstream 31981 15828929 ~ 15835050 (+)
AMCG00017658 NA coding upstream 72584 15609983 ~ 15794447 (+)
AMCG00017657 slc7a11,LOC107740166,LOC107593222,LOC107680987 coding upstream 261921 15599419 ~ 15605110 (+)
AMCG00017654 NA coding upstream 654772 15207609 ~ 15212259 (+)
AMCG00017655 NA coding upstream 672867 15193702 ~ 15194164 (+)
AMCG00017662 NA coding downstream 1528097 17395731 ~ 17428335 (+)
AMCG00017666 pgrmc2 coding downstream 1641617 17509251 ~ 17511291 (+)
AMCG00017667 mfsd8 coding downstream 1710421 17578055 ~ 17585825 (+)
AMCG00017673 NA coding downstream 1808975 17676609 ~ 17692389 (+)
AMCG00017679 reep1,LOC107719410,LOC107731967,LOC107703485,LOC107561684 coding downstream 1886891 17754525 ~ 17782183 (+)
G92095 NA non-coding upstream 339153 15527561 ~ 15527878 (+)
G92059 NA non-coding upstream 704339 15162330 ~ 15162692 (+)
G92038 NA non-coding upstream 781633 15062297 ~ 15085398 (+)
G92039 LOC107556532,LOC102237872,LOC107674234,LOC107737080 non-coding upstream 799213 15066137 ~ 15067818 (+)
G92016 NA non-coding upstream 830650 14943383 ~ 15036381 (+)
G92133 NA non-coding downstream 299008 16166642 ~ 16182070 (+)
G92145 NA non-coding downstream 447420 16315054 ~ 16315523 (+)
G92147 LOC102215562 non-coding downstream 562818 16430452 ~ 16430712 (+)
G92151 NA non-coding downstream 736017 16603651 ~ 16603919 (+)
G92152 NA non-coding downstream 796232 16663866 ~ 16664235 (+)
AMCG00017650 NA other upstream 751000 15109422 ~ 15116031 (+)
AMCG00017652 NA other upstream 760196 15093191 ~ 15106835 (+)
AMCG00017651 NA other upstream 776202 15088132 ~ 15090829 (+)
G92046 NA other upstream 782753 15077325 ~ 15084278 (+)
AMCG00017620 htra3,LOC106577909 other upstream 1827968 14025636 ~ 14039063 (+)
G92130 LOC101154678 other downstream 267391 16135025 ~ 16135316 (+)
AMCG00017668 NA other downstream 1733901 17601535 ~ 17620033 (+)
AMCG00017674 rnf103,LOC107722440 other downstream 1831289 17698923 ~ 17723950 (+)
G92538 NA other downstream 3205604 19073238 ~ 19073662 (+)
AMCG00017710 nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 other downstream 3528394 19396028 ~ 19433103 (+)

Expression


Co-expression Network