G92147 (LOC102215562)


Basic Information

Item Value
gene id G92147
gene name LOC102215562
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 16430452 ~ 16430712 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU114935
cccagggaggttggctacagttccatggaccttgaacttcttaataatatttgcaactgttgtcacaggaacatcaagctgcttggagatggtcttgtagcctttacctttaccatgcttgtctattattttctttctgatctcctcagacaactctctcctttgctttctctggtccatgttcagtgtggtgcacacaatgataccaaatgacacagtgactactttcctccatttaaataggctgaatgactgattact

Function

NR:

description
PREDICTED: contactin-associated protein-like 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114935 True 261 lncRNA 0.42 1 16430452 16430712

Neighbor

gene id symbol gene type direction distance location
AMCG00017656 NA coding upstream 595402 15828929 ~ 15835050 (+)
AMCG00017658 NA coding upstream 636005 15609983 ~ 15794447 (+)
AMCG00017657 slc7a11,LOC107740166,LOC107593222,LOC107680987 coding upstream 825342 15599419 ~ 15605110 (+)
AMCG00017654 NA coding upstream 1218193 15207609 ~ 15212259 (+)
AMCG00017655 NA coding upstream 1236288 15193702 ~ 15194164 (+)
AMCG00017662 NA coding downstream 965019 17395731 ~ 17428335 (+)
AMCG00017666 pgrmc2 coding downstream 1078539 17509251 ~ 17511291 (+)
AMCG00017667 mfsd8 coding downstream 1147343 17578055 ~ 17585825 (+)
AMCG00017673 NA coding downstream 1245897 17676609 ~ 17692389 (+)
AMCG00017679 reep1,LOC107719410,LOC107731967,LOC107703485,LOC107561684 coding downstream 1323813 17754525 ~ 17782183 (+)
G92145 NA non-coding upstream 114929 16315054 ~ 16315523 (+)
G92133 NA non-coding upstream 248382 16166642 ~ 16182070 (+)
G92095 NA non-coding upstream 902574 15527561 ~ 15527878 (+)
G92059 NA non-coding upstream 1267760 15162330 ~ 15162692 (+)
G92038 NA non-coding upstream 1345054 15062297 ~ 15085398 (+)
G92151 NA non-coding downstream 172939 16603651 ~ 16603919 (+)
G92152 NA non-coding downstream 233154 16663866 ~ 16664235 (+)
G92169 NA non-coding downstream 410741 16841453 ~ 16909914 (+)
G92178 NA non-coding downstream 566506 16997218 ~ 16997459 (+)
G92182 NA non-coding downstream 730533 17161245 ~ 17161645 (+)
G92130 LOC101154678 other upstream 295136 16135025 ~ 16135316 (+)
G92123 LOC101154678 other upstream 562818 15867031 ~ 15867634 (+)
AMCG00017650 NA other upstream 1314421 15109422 ~ 15116031 (+)
AMCG00017652 NA other upstream 1323617 15093191 ~ 15106835 (+)
AMCG00017651 NA other upstream 1339623 15088132 ~ 15090829 (+)
AMCG00017668 NA other downstream 1170823 17601535 ~ 17620033 (+)
AMCG00017674 rnf103,LOC107722440 other downstream 1268211 17698923 ~ 17723950 (+)
G92538 NA other downstream 2642526 19073238 ~ 19073662 (+)
AMCG00017710 nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 other downstream 2965316 19396028 ~ 19433103 (+)
AMCG00017712 NA other downstream 3013460 19444172 ~ 19528293 (+)

Expression


Co-expression Network