G92148 (LOC102215562)


Basic Information

Item Value
gene id G92148
gene name LOC102215562
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 16430456 ~ 16430711 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU114936
gtaatcagtcattcagcctatttaaatggaggaaagtagtcactgtgtcatttggtatcattgtgtgcaccacactgaacatggaccagagaaagcaaaggagagagttgtctgaggagatcagaaagaaaataatagacaagcatggtaaaggtaaaggctacaagaccatctccaagcagcttgatgttcctgtgacaacagttgcaaatattattaagaagttcaaggtccatggaactgtagccaacctccc

Function

NR:

description
PREDICTED: contactin-associated protein-like 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114936 True 256 lncRNA 0.41 1 16430456 16430711

Neighbor

gene id symbol gene type direction distance location
AMCG00017659 NA coding downstream 1195687 15223502 ~ 15234769 (-)
AMCG00017660 tada2b coding downstream 1216711 15213497 ~ 15213745 (-)
AMCG00017648 naa15,LOC105908469,LOC108263533,LOC108434806 coding downstream 1350150 15075823 ~ 15080306 (-)
AMCG00017647 LOC108434806,LOC107737080,LOC105908469,LOC107712022 coding downstream 1355937 15063427 ~ 15074519 (-)
AMCG00017645 rab33b,LOC102236194,LOC106911658,LOC101473034,LOC100689790,LOC102313972 coding downstream 1377793 15043670 ~ 15052663 (-)
AMCG00017661 pcdh10,pcdh10a,LOC106604685,LOC104931883 coding upstream 354957 16785668 ~ 16797841 (-)
AMCG00017664 NA coding upstream 994700 17425411 ~ 17462601 (-)
AMCG00017670 NA coding upstream 1084172 17514883 ~ 17531328 (-)
AMCG00017671 abhd18,LOC107595739,LOC107653339 coding upstream 1127733 17558444 ~ 17575772 (-)
AMCG00017672 NA coding upstream 1158170 17588881 ~ 17599693 (-)
G92146 NA non-coding downstream 114934 16315045 ~ 16315522 (-)
G92135 NA non-coding downstream 248128 16182129 ~ 16182328 (-)
G92134 NA non-coding downstream 248393 16166639 ~ 16182063 (-)
G92132 LOC104962440 non-coding downstream 294749 16135380 ~ 16135707 (-)
G92093 NA non-coding downstream 944694 15485257 ~ 15485762 (-)
G92156 NA non-coding upstream 325719 16756430 ~ 16756667 (-)
G92176 NA non-coding upstream 495783 16926494 ~ 16926810 (-)
G92179 NA non-coding upstream 566509 16997220 ~ 16997504 (-)
G92183 NA non-coding upstream 730534 17161245 ~ 17161645 (-)
G92200 NA non-coding upstream 821719 17252430 ~ 17252630 (-)
G92129 NA other downstream 399551 16030402 ~ 16030905 (-)
G92124 LOC101154678 other downstream 562809 15866947 ~ 15867647 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other downstream 1665624 14760068 ~ 14764832 (-)
AMCG00017631 NA other downstream 1945638 14433158 ~ 14484818 (-)
AMCG00017582 NA other downstream 4108086 12307781 ~ 12322370 (-)
AMCG00017663 NA other upstream 956773 17387484 ~ 17395049 (-)
AMCG00017665 NA other upstream 1037894 17468605 ~ 17487497 (-)
AMCG00017675 NA other upstream 1350937 17781648 ~ 17789749 (-)
G92436 NA other upstream 2032073 18462784 ~ 18463176 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other upstream 2982276 19412987 ~ 19419356 (-)

Expression


Co-expression Network