Gene
RNA
| Item | Value |
|---|---|
| gene id | G92182 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 17161245 ~ 17161645 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: glycoprotein endo-alpha-1,2-mannosidase-like protein |
| id | name | namespace |
|---|---|---|
| GO:0008213 | protein alkylation | biological_process |
| GO:0043414 | macromolecule methylation | biological_process |
| GO:0006479 | protein methylation | biological_process |
| GO:0016569 | covalent chromatin modification | biological_process |
| GO:0016570 | histone modification | biological_process |
| GO:0016571 | histone methylation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU114974 | True | 401 | lncRNA | 0.31 | 1 | 17161245 | 17161645 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017656 | NA | coding | upstream | 1326195 | 15828929 ~ 15835050 (+) |
| AMCG00017658 | NA | coding | upstream | 1366798 | 15609983 ~ 15794447 (+) |
| AMCG00017657 | slc7a11,LOC107740166,LOC107593222,LOC107680987 | coding | upstream | 1556135 | 15599419 ~ 15605110 (+) |
| AMCG00017654 | NA | coding | upstream | 1948986 | 15207609 ~ 15212259 (+) |
| AMCG00017655 | NA | coding | upstream | 1967081 | 15193702 ~ 15194164 (+) |
| AMCG00017662 | NA | coding | downstream | 234086 | 17395731 ~ 17428335 (+) |
| AMCG00017666 | pgrmc2 | coding | downstream | 347606 | 17509251 ~ 17511291 (+) |
| AMCG00017667 | mfsd8 | coding | downstream | 416410 | 17578055 ~ 17585825 (+) |
| AMCG00017673 | NA | coding | downstream | 514964 | 17676609 ~ 17692389 (+) |
| AMCG00017679 | reep1,LOC107719410,LOC107731967,LOC107703485,LOC107561684 | coding | downstream | 592880 | 17754525 ~ 17782183 (+) |
| G92178 | NA | non-coding | upstream | 163786 | 16997218 ~ 16997459 (+) |
| G92169 | NA | non-coding | upstream | 251331 | 16841453 ~ 16909914 (+) |
| G92152 | NA | non-coding | upstream | 497010 | 16663866 ~ 16664235 (+) |
| G92151 | NA | non-coding | upstream | 557326 | 16603651 ~ 16603919 (+) |
| G92147 | LOC102215562 | non-coding | upstream | 730533 | 16430452 ~ 16430712 (+) |
| G92197 | NA | non-coding | downstream | 80171 | 17241816 ~ 17242064 (+) |
| G92228 | NA | non-coding | downstream | 278015 | 17439660 ~ 17440209 (+) |
| G92229 | jade1,LOC107712027 | non-coding | downstream | 279013 | 17440658 ~ 17440964 (+) |
| G92230 | NA | non-coding | downstream | 283980 | 17445625 ~ 17445993 (+) |
| G92267 | NA | non-coding | downstream | 404998 | 17566643 ~ 17568163 (+) |
| G92130 | LOC101154678 | other | upstream | 1025929 | 16135025 ~ 16135316 (+) |
| G92123 | LOC101154678 | other | upstream | 1293611 | 15867031 ~ 15867634 (+) |
| AMCG00017650 | NA | other | upstream | 2045214 | 15109422 ~ 15116031 (+) |
| AMCG00017652 | NA | other | upstream | 2054410 | 15093191 ~ 15106835 (+) |
| AMCG00017651 | NA | other | upstream | 2070416 | 15088132 ~ 15090829 (+) |
| AMCG00017668 | NA | other | downstream | 439890 | 17601535 ~ 17620033 (+) |
| AMCG00017674 | rnf103,LOC107722440 | other | downstream | 537278 | 17698923 ~ 17723950 (+) |
| G92538 | NA | other | downstream | 1911593 | 19073238 ~ 19073662 (+) |
| AMCG00017710 | nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 | other | downstream | 2234383 | 19396028 ~ 19433103 (+) |
| AMCG00017712 | NA | other | downstream | 2282527 | 19444172 ~ 19528293 (+) |
