G92313


Basic Information

Item Value
gene id G92313
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 17713903 ~ 17714182 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU115135
agtctatgtggactcctcactttctccatccaaacaatgtggggaagcaataaaaaaggcaaacaggatgttaggatatattgtcaaaagtgtagaattgaaaacaagggcagtaatgttcagactgtacaatgcactagttagagctcatctggatactgtgtgcagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattctaggtctgaagggaatgtcctactgagagactgaggaac

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0043603 cellular amide metabolic process biological_process
GO:0043604 amide biosynthetic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0009059 macromolecule biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0010467 gene expression biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0044267 cellular protein metabolic process biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0006518 peptide metabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0034645 cellular macromolecule biosynthetic process biological_process

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU115135 True 280 lncRNA 0.43 1 17713903 17714182

Neighbor

gene id symbol gene type direction distance location
AMCG00017677 NA coding downstream 16463 17683162 ~ 17697440 (-)
AMCG00017669 NA coding downstream 49118 17620902 ~ 17664785 (-)
AMCG00017672 NA coding downstream 114210 17588881 ~ 17599693 (-)
AMCG00017671 abhd18,LOC107595739,LOC107653339 coding downstream 138131 17558444 ~ 17575772 (-)
AMCG00017670 NA coding downstream 182575 17514883 ~ 17531328 (-)
AMCG00017676 NA coding upstream 6919 17721101 ~ 17734579 (-)
AMCG00017680 NA coding upstream 110876 17825058 ~ 17833817 (-)
AMCG00017684 NA coding upstream 214251 17928433 ~ 17942165 (-)
AMCG00017688 NA coding upstream 459969 18174151 ~ 18177011 (-)
AMCG00017686 NA coding upstream 467383 18181565 ~ 18189353 (-)
G92200 NA non-coding downstream 461273 17252430 ~ 17252630 (-)
G92183 NA non-coding downstream 552258 17161245 ~ 17161645 (-)
G92179 NA non-coding downstream 716399 16997220 ~ 16997504 (-)
G92176 NA non-coding downstream 787093 16926494 ~ 16926810 (-)
G92156 NA non-coding downstream 957236 16756430 ~ 16756667 (-)
G92375 NA non-coding upstream 139745 17853927 ~ 17855416 (-)
G92386 NA non-coding upstream 176160 17890342 ~ 17891070 (-)
G92401 NA non-coding upstream 390807 18104989 ~ 18105268 (-)
G92428 NA non-coding upstream 673623 18387805 ~ 18452812 (-)
G92434 NA non-coding upstream 745387 18459569 ~ 18459816 (-)
AMCG00017665 NA other downstream 226406 17468605 ~ 17487497 (-)
AMCG00017663 NA other downstream 318854 17387484 ~ 17395049 (-)
G92129 NA other downstream 1682998 16030402 ~ 16030905 (-)
G92124 LOC101154678 other downstream 1846256 15866947 ~ 15867647 (-)
AMCG00017638 scoc,LOC103463814,LOC103132857 other downstream 2949071 14760068 ~ 14764832 (-)
AMCG00017675 NA other upstream 67466 17781648 ~ 17789749 (-)
G92436 NA other upstream 748602 18462784 ~ 18463176 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other upstream 1698805 19412987 ~ 19419356 (-)
AMCG00017725 NA other upstream 2587818 20302000 ~ 20358625 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 5603911 23318093 ~ 23321954 (-)

Expression


Co-expression Network