G92386



Basic Information


Item Value
gene id G92386
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 17890342 ~ 17891070 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU115229
TTCttatgatcattgaaactccacgaggtgagatcttgcatggagcccccgACCGGGGGAggctgacagttattttgtgtttcttccatttgcgaataatcgcaccaactgttgtcaccttctcaccaagctgcttggcgatggtcttgtagcccattccagccttgtgtaggtctacaatcttgtccctgacatccttggacagctctttggtcttggccatggtggagagtttggaatctgattgattgattgcttctgtggacaggtgtcttttatacagtgctcctaatctcagctcgttacctgtataaaagacacctgggagccagaaatcttgctgattgataggggatcaaatacttatttccctcattaacatgcaaatcaattttttaacttttttgaaatgcgtttttctggatttttttgttcttattctgtctctcactgttaaaatacacctaccatgaaaatgatagactgatcatttctttgccAGTGGGCAAACgtgcaaaatcagcaggggatcaaatagttttttccctcactgtaagttgACTTTACTTGAAAAATCATGCAAACTCATTGCCTTGAAACAATCAAGTGAAGGAACTTTGTAGGCTCAAGGTAATGTTACTTCAGATTATGAGTTTAAATACCTTTCctattttgaatacattacaCTAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU115229 True 691 lncRNA 0.40 2 17890342 17891070

Neighbor


gene id symbol gene type direction distance location
AMCG00017680 NA coding downstream 56525 17825058 ~ 17833817 (-)
AMCG00017676 NA coding downstream 155763 17721101 ~ 17734579 (-)
AMCG00017677 NA coding downstream 192902 17683162 ~ 17697440 (-)
AMCG00017669 NA coding downstream 225557 17620902 ~ 17664785 (-)
AMCG00017672 NA coding downstream 290649 17588881 ~ 17599693 (-)
AMCG00017684 NA coding upstream 37363 17928433 ~ 17942165 (-)
AMCG00017688 NA coding upstream 283081 18174151 ~ 18177011 (-)
AMCG00017686 NA coding upstream 290495 18181565 ~ 18189353 (-)
AMCG00017687 zgc:136929,LOC107742495,LOC107665264 coding upstream 341338 18232408 ~ 18268748 (-)
AMCG00017694 NA coding upstream 607059 18498129 ~ 18501874 (-)
G92375 NA non-coding downstream 34926 17853927 ~ 17855416 (-)
G92313 NA non-coding downstream 176160 17713903 ~ 17714182 (-)
G92200 NA non-coding downstream 637712 17252430 ~ 17252630 (-)
G92183 NA non-coding downstream 728697 17161245 ~ 17161645 (-)
G92179 NA non-coding downstream 892838 16997220 ~ 16997504 (-)
G92401 NA non-coding upstream 213919 18104989 ~ 18105268 (-)
G92428 NA non-coding upstream 496735 18387805 ~ 18452812 (-)
G92434 NA non-coding upstream 568499 18459569 ~ 18459816 (-)
G92435 uvssa non-coding upstream 570298 18461368 ~ 18461702 (-)
G92440 NA non-coding upstream 590701 18481771 ~ 18482074 (-)
AMCG00017675 NA other downstream 100593 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 402845 17468605 ~ 17487497 (-)
AMCG00017663 NA other downstream 495293 17387484 ~ 17395049 (-)
G92129 NA other downstream 1859437 16030402 ~ 16030905 (-)
G92124 LOC101154678 other downstream 2022695 15866947 ~ 15867647 (-)
G92436 NA other upstream 571714 18462784 ~ 18463176 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other upstream 1521917 19412987 ~ 19419356 (-)
AMCG00017725 NA other upstream 2410930 20302000 ~ 20358625 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 5427023 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 6373609 24264679 ~ 24270595 (-)

Expression



Co-expression Network