G92591 (nansa,LOC108416893,LOC108416857,LOC107723182)


Basic Information

Item Value
gene id G92591
gene name nansa,LOC108416893,LOC108416857,LOC107723182
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 19412987 ~ 19419356 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU115492
NNNNNCCGCACAGTGGAGAGGGCCCTGGGGTCTGGCATCAAGAGGATGCTGCCCTGTGAAAAGCCTTGTCATGACAAGCTGGGCAAGTCTGTAGTGGCCAAGAAGGCCATTCCCAAGGGCACAGAACTGAGCCTGGACATGCTGGCAGTGAAGGTGGCCGAGCCCAAGGGAGTGCCTCCAGAGGACATCTTCCAGCTGGTGGGCAAGGAGGTCAATGTAGATATAGAGGAAGATGACAGCATCACTGAAGATGTGATTGAATACtatggaaagaaaattaaatgctgACAGCTTTCATAGCCTGAAGAtaactatataaaaaagtaaaccaATTCCTTTGATAAAGGACGTGGGATTGAAGAAGGCACTTATGAGTCGATCCAAGGATGTTGTAGGTATTGTGTAGTAAAAAAGGGCTGTTCTtggaatatttattattattgcttccAGTGATTTTGATCAGGGGGTTACAAATGTGGGTTTAACTGTGACTCTAGCACCAGACAAAAGTTTCTATACATTTCATACTCTACTGCCCAACTGCTTTATATAGcagtgtataaaataaattacatcttATATCTAACATCTCTGATTTGCTCTATCTGCACTACACAAGATACTACTACAGCTTTGACTGAGGGGAGCTAGTACATTGGGATTGTCCTAAAGGCTcttctaaaaaaaacatgaaaagaatgTATGGGCACTAGATTTATTCAAGGTTGAAATTGTAGGGGGCAAACATTCATGTTtgtcatgtttaattttgtttaaagcaGTTGTACCAAAAGATGGGGGGATACTTCTTTCATCACTCTGCCTTATATgtcaaatggtttattttgtattgataaataaaaacatacttaaaaCA
>TU115494
NNNNNCCGCACAGTGGAGAGGGCCCTGGGGTCTGGCATCAAGAGGATGCTGCCCTGTGAAAAGCCTTGTCATGACAAGCTGGGCAAGTCTGTAGTGGCCAAGAAGGCCATTCCCAAGGGCACAGAACTGAGCCTGGACATGCTGGCAGTGAAGCTGGAAGATCTCCTCTGGAGCCACGCCCCTGGGTTCAGCCACCTTCACTGCCAGCATGTCCAGGCTCAGCGCCGTACCCTTTGCAATCGCCTTCTTGGCCACCACAGACTTGCCCAGCTGGAAAGAAGAAAGACGATGTGTCAAACATTGCACGAGTTGGAAACCATCAATTAATCAACTAATCAATTAATCCAATCCATTTGCAAAGTTGCCACAGAGTGcttaaaacagattaaaacagcCTATCTTACCTTGCTATGACAGGATGTCTCACAGGGCAGCATCCTCTTGATGCCAGACCCCAGGGCCCTCTCCACTGTGCGG

Function

symbol description
nansa Predicted to enable N-acylneuraminate-9-phosphate synthase activity. Acts upstream of or within embryonic skeletal system development. Predicted to be located in extracellular region. Is expressed in several structures, including alar plate midbrain region; axis; digestive system; hatching gland; and polster. Human ortholog(s) of this gene implicated in spondyloepimetaphyseal dysplasia, Genevieve-type. Orthologous to human NANS (N-acetylneuraminate synthase).

NR:

description
PREDICTED: sialic acid synthase-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115492 True 877 TUCP 0.40 2 19418201 19419356
TU115494 False 477 TUCP 0.52 3 19412987 19419356

Neighbor

gene id symbol gene type direction distance location
AMCG00017709 clta,LOC105903562 coding downstream 28904 19367714 ~ 19384083 (-)
AMCG00017707 cplx2,LOC107751330,LOC103366469,LOC107562368,LOC107390991,LOC106528338,LOC102782538,LOC100705952 coding downstream 210162 19196121 ~ 19202825 (-)
AMCG00017701 NA coding downstream 488551 18913165 ~ 18924436 (-)
AMCG00017700 NA coding downstream 501116 18907263 ~ 18911871 (-)
AMCG00017702 NA coding downstream 516480 18890221 ~ 18896507 (-)
AMCG00017711 NA coding upstream 6683 19426039 ~ 19433689 (-)
AMCG00017715 ostc,LOC106609071,LOC106577458 coding upstream 232160 19651516 ~ 19654680 (-)
AMCG00017716 rpl34,LOC107566275 coding upstream 237577 19656933 ~ 19659528 (-)
AMCG00017720 NA coding upstream 277197 19696553 ~ 19810128 (-)
AMCG00017728 NA coding upstream 449643 19868999 ~ 19869457 (-)
G92541 NA non-coding downstream 286638 19126060 ~ 19126349 (-)
G92539 NA non-coding downstream 339122 19073238 ~ 19073865 (-)
G92499 NA non-coding downstream 562359 18850062 ~ 18850628 (-)
G92464 NA non-coding downstream 649326 18763097 ~ 18763661 (-)
G92444 NA non-coding downstream 919757 18492538 ~ 18493230 (-)
G92608 NA non-coding upstream 193349 19612705 ~ 19613182 (-)
G92609 NA non-coding upstream 193885 19613241 ~ 19617787 (-)
G92657 NA non-coding upstream 446616 19865972 ~ 19866417 (-)
G92660 NA non-coding upstream 448062 19867418 ~ 19867636 (-)
G92682 NA non-coding upstream 486636 19905992 ~ 19920152 (-)
G92436 NA other downstream 949811 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 1623238 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 1925490 17468605 ~ 17487497 (-)
AMCG00017663 NA other downstream 2017938 17387484 ~ 17395049 (-)
G92129 NA other downstream 3382082 16030402 ~ 16030905 (-)
AMCG00017725 NA other upstream 882644 20302000 ~ 20358625 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 3898737 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 4845323 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 5526739 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 5578188 24997544 ~ 25018212 (-)

Expression


Co-expression Network