G92800



Basic Information


Item Value
gene id G92800
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 20634672 ~ 20634880 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU115751
GGGACAAAAGGACCTCTCAAAAATCCCATCACCCATATCATTATCATTACGACAAGAGAgcatacagggaaaataatggACTAAAAGGAAAGAGATCAAAGACCTGAATGCAGAGAGTACTGCACAGATGCATCTGGAAACAGCACCGATGATATTagagacattacattttcagaccAGTCATTTTCATGGTCTTATCAGGAATCAGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU115751 True 209 lncRNA 0.40 1 20634672 20634880

Neighbor


gene id symbol gene type direction distance location
AMCG00017737 ndufb6 coding downstream 6689 20626084 ~ 20627983 (-)
AMCG00017741 NA coding downstream 12567 20620406 ~ 20622105 (-)
AMCG00017733 NA coding downstream 18443 20603355 ~ 20616229 (-)
AMCG00017739 mtap,LOC107595051 coding downstream 33271 20595312 ~ 20601401 (-)
AMCG00017735 mtap coding downstream 49711 20571457 ~ 20584961 (-)
AMCG00017749 LOC107702147,LOC107737977 coding upstream 18265 20653145 ~ 20667672 (-)
AMCG00017748 NA coding upstream 55341 20690221 ~ 20741395 (-)
AMCG00017751 NA coding upstream 113275 20748155 ~ 20774424 (-)
AMCG00017752 LOC107591574,LOC106602091,LOC107750449,LOC101068444 coding upstream 246613 20881493 ~ 20913956 (-)
AMCG00017753 NA coding upstream 494477 21129357 ~ 21136560 (-)
G92798 NA non-coding downstream 10252 20624143 ~ 20624420 (-)
G92714 NA non-coding downstream 219060 20415306 ~ 20415612 (-)
G92682 NA non-coding downstream 714520 19905992 ~ 19920152 (-)
G92660 NA non-coding downstream 767036 19867418 ~ 19867636 (-)
G92657 NA non-coding downstream 768255 19865972 ~ 19866417 (-)
G92822 NA non-coding upstream 37185 20672065 ~ 20676278 (-)
G92823 NA non-coding upstream 41779 20676659 ~ 20734422 (-)
G92836 NA non-coding upstream 182795 20817675 ~ 20822960 (-)
G92838 NA non-coding upstream 185586 20820466 ~ 20821995 (-)
G92892 NA non-coding upstream 493591 21128471 ~ 21128999 (-)
AMCG00017725 NA other downstream 276047 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 1215316 19412987 ~ 19419356 (-)
G92436 NA other downstream 2171496 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 2844923 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 3147175 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 2683213 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 3629799 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 4311215 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 4362664 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 5310261 25945141 ~ 25957648 (-)

Expression



Co-expression Network