G92823



Basic Information


Item Value
gene id G92823
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 20676659 ~ 20734422 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU115778
taatggtaggtAGCACCTTCAAATGTAAAAACCCAGCTGAAGATAGTGTATTGGTAGGTAGCACCTTTCCTGTGATTCGTGATCTTAATTCAGTGCCCTTTTCCCAAATAAAGTTGAGCAAATGTCCATAGGGACTCTGCATAGACATTCTTACTTCATTTTTTAGTAAGAtcaaatgtactttatttaaacccagttaatgtaaattattacaGGTTAAAACAAGCAAAGGAACACGGCTGTCCTGCAGTCTCGGATGCATTGCAATCCCTTACAGTGCTGCTCACAGTTCTTGAATTAAACATTGCAtgttaaactgaacaaaagcaatcattttcaggtttttaagAAGGTGGCGACTGAACAAGATCAACTGAACTTGCAGAACAGTAGCCCTCATGGCCCAGGGATGAAGTTACATGGTGAAGAGCGGAAATTATCTCATTGATTGTTTAgtagttttaattaaaggaatATTAAAGGCGTTAGACAAGGAAGACTACTTTCCTACAATGTTAGGTGGCACATACAGATTACAAGTGCTTCAAAAATAAACTCCATCAGACTTTCACAATGGCCTTTCCAATGTTGTCTCCTTTCAGCATCCCCATGAAGGCTGCGGGCATTTTGTCAAAGCCCGTGGTGATGTGTTCGCTGTACTTCAGTTTTCCCTACACACGGGACATGACACACTCATCATCCAGTTCAATCgattaataaac

Function


GO: NA

KEGG:

id description
ko04976 Bile secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA


RNA id representative length rna type GC content exon number start site end site
TU115778 True 722 lncRNA 0.39 2 20676659 20734422

Neighbor


gene id symbol gene type direction distance location
AMCG00017749 LOC107702147,LOC107737977 coding downstream 8987 20653145 ~ 20667672 (-)
AMCG00017737 ndufb6 coding downstream 48676 20626084 ~ 20627983 (-)
AMCG00017741 NA coding downstream 54554 20620406 ~ 20622105 (-)
AMCG00017733 NA coding downstream 60430 20603355 ~ 20616229 (-)
AMCG00017739 mtap,LOC107595051 coding downstream 75258 20595312 ~ 20601401 (-)
AMCG00017751 NA coding upstream 13733 20748155 ~ 20774424 (-)
AMCG00017752 LOC107591574,LOC106602091,LOC107750449,LOC101068444 coding upstream 147071 20881493 ~ 20913956 (-)
AMCG00017753 NA coding upstream 394935 21129357 ~ 21136560 (-)
AMCG00017759 NA coding upstream 561625 21296047 ~ 21304123 (-)
AMCG00017758 ptprd,LOC106577623 coding upstream 582045 21316467 ~ 21369489 (-)
G92822 NA non-coding downstream 381 20672065 ~ 20676278 (-)
G92800 NA non-coding downstream 41779 20634672 ~ 20634880 (-)
G92798 NA non-coding downstream 52239 20624143 ~ 20624420 (-)
G92714 NA non-coding downstream 261047 20415306 ~ 20415612 (-)
G92682 NA non-coding downstream 756507 19905992 ~ 19920152 (-)
G92836 NA non-coding upstream 83253 20817675 ~ 20822960 (-)
G92838 NA non-coding upstream 86044 20820466 ~ 20821995 (-)
G92892 NA non-coding upstream 394049 21128471 ~ 21128999 (-)
G92943 NA non-coding upstream 1239562 21973984 ~ 21974289 (-)
G92947 NA non-coding upstream 1310558 22044980 ~ 22124742 (-)
AMCG00017725 NA other downstream 318034 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 1257303 19412987 ~ 19419356 (-)
G92436 NA other downstream 2213483 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 2886910 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 3189162 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 2583671 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 3530257 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 4211673 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 4263122 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 5210719 25945141 ~ 25957648 (-)

Expression



Co-expression Network