G92838


Basic Information

Item Value
gene id G92838
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 20820466 ~ 20821995 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU115796
ccatataaaacagcagaaacaatatccttcacataataataaatcataaataatacaataaatatttcaataaataccactgtttacaattttaaagaaagttcacaataccttaaaaaatatgcacatatatatttaacacttagatttataaacacatttgaacCAGTCAATTATCATTGTTTATAAacttaattgcattttcattaaaaataaacacatcagcCTTGATTAGTTTCTGATACAGACATCAAACAATAGTGGTCACTGTTATCTTCAGAATAAGAGGCAGACTGGCTCAGATTCTAAGCGTTAAATTGAGAGAGCGCCTGACACAGACCAGCTGTGTCTtacataaacaaatcatttGAATGTGATCTTGTAGTTTCCTTCACAACATTCTTACTTCGGTCTTCAGGATTACaagTTTTCAAGATTGCATtgatcaaaattttgacccaagGAGCTGTTGGTTCTAAGCAGATTTTGTTGCCCGTGTTCAAAGTTGCACTGCAAGTTAAAAGagagtaaacacaattaaaacctgttttgttatttaatctCAGATGTAAAAGCTATCACTGGTAAATGGTACATTAGGCAAAGAAGTGTTTCCCTGAATTgctaaattaaagtaaattaaaattaaattggagtaatttaaatctataaatagaATCGGTTacaactaaatatataattttcatattaaaGTAATTGCTGTTTGTTgatgtttaatttttgtttaacaatttaatCCTAAACTCAGAATGAACATGCAGCTACACTTACATGACTTCAGCATCCTTGCAGTGAGGTCCACTGGGAAAGAGCTCCACATTCTTGATAAGTCTTGGGTGGATGAAGCGACTCTCCTTTTTGATGCACTGACAGCGCAGCTCTGTTCCCAGGCTCTTCACAGACATCCCTGTGGAGGAGAAGTTACTGgttaataatcaataataaccAGTAGAATTATGAAACATAAAccaaaacacaattacattaaGTATGAGCTAAGCTACTTTCTCTTCCATTATTTCATTAGTTATGTCTCATCTTGTGTATTCAGAAAGAAAAGTCTTACCTTCAGAGAGAGTAGCAAAGGCCAGGCAGAGAACGAGAACAGTGACTGTGATCTTGCAGCTCATGATGTTGTCTTGGTTGGAGATTGCTGTGTTGGGAGATCAGGCTTCTTGTTTCTGGCTCAGCTGAGTTTGAATCTGCCACCGTTCAGCACAGCAGCTCCTTTTGTAGCCCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU115796 True 1262 lncRNA 0.35 2 20820466 20821995

Neighbor

gene id symbol gene type direction distance location
AMCG00017751 NA coding downstream 46042 20748155 ~ 20774424 (-)
AMCG00017748 NA coding downstream 79071 20690221 ~ 20741395 (-)
AMCG00017749 LOC107702147,LOC107737977 coding downstream 152794 20653145 ~ 20667672 (-)
AMCG00017737 ndufb6 coding downstream 192483 20626084 ~ 20627983 (-)
AMCG00017741 NA coding downstream 198361 20620406 ~ 20622105 (-)
AMCG00017752 LOC107591574,LOC106602091,LOC107750449,LOC101068444 coding upstream 59498 20881493 ~ 20913956 (-)
AMCG00017753 NA coding upstream 307362 21129357 ~ 21136560 (-)
AMCG00017759 NA coding upstream 474052 21296047 ~ 21304123 (-)
AMCG00017758 ptprd,LOC106577623 coding upstream 494472 21316467 ~ 21369489 (-)
AMCG00017757 ptprd,LOC103370113 coding upstream 577306 21399301 ~ 21403260 (-)
G92823 NA non-coding downstream 86044 20676659 ~ 20734422 (-)
G92822 NA non-coding downstream 144188 20672065 ~ 20676278 (-)
G92800 NA non-coding downstream 185586 20634672 ~ 20634880 (-)
G92798 NA non-coding downstream 196046 20624143 ~ 20624420 (-)
G92714 NA non-coding downstream 404854 20415306 ~ 20415612 (-)
G92892 NA non-coding upstream 306476 21128471 ~ 21128999 (-)
G92943 NA non-coding upstream 1151989 21973984 ~ 21974289 (-)
G92947 NA non-coding upstream 1222985 22044980 ~ 22124742 (-)
G92948 LOC107575789 non-coding upstream 1270970 22092965 ~ 22093405 (-)
G92953 NA non-coding upstream 1330377 22152372 ~ 22152578 (-)
AMCG00017725 NA other downstream 461841 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 1401110 19412987 ~ 19419356 (-)
G92436 NA other downstream 2357290 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 3030717 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 3332969 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 2496098 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 3442684 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 4124100 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 4175549 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 5123146 25945141 ~ 25957648 (-)

Expression


Co-expression Network