Gene
RNA
| Item | Value |
|---|---|
| gene id | G93039 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 22878078 ~ 22878468 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU116068 | True | 391 | lncRNA | 0.41 | 1 | 22878078 | 22878468 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017766 | NA | coding | upstream | 190756 | 22686558 ~ 22687322 (+) |
| AMCG00017765 | adgrl3 | coding | upstream | 209625 | 22661066 ~ 22668453 (+) |
| AMCG00017768 | NA | coding | upstream | 237167 | 22615922 ~ 22640911 (+) |
| AMCG00017769 | NA | coding | upstream | 281741 | 22596047 ~ 22596337 (+) |
| AMCG00017764 | NA | coding | upstream | 284098 | 22590793 ~ 22593980 (+) |
| AMCG00017772 | NA | coding | downstream | 128555 | 23007023 ~ 23020463 (+) |
| AMCG00017774 | NA | coding | downstream | 223494 | 23101962 ~ 23129457 (+) |
| AMCG00017773 | LOC106577627,LOC106944166,LOC103146371 | coding | downstream | 265004 | 23143472 ~ 23152780 (+) |
| AMCG00017779 | NA | coding | downstream | 287879 | 23166347 ~ 23168345 (+) |
| AMCG00017778 | LOC103387471 | coding | downstream | 334943 | 23213411 ~ 23215360 (+) |
| G93027 | NA | non-coding | upstream | 99975 | 22777728 ~ 22778103 (+) |
| G92956 | NA | non-coding | upstream | 646186 | 22231457 ~ 22231892 (+) |
| G92954 | LOC101154678 | non-coding | upstream | 657299 | 22220524 ~ 22220779 (+) |
| G92952 | NA | non-coding | upstream | 725498 | 22152321 ~ 22152580 (+) |
| G92878 | NA | non-coding | upstream | 1749098 | 21128700 ~ 21128980 (+) |
| G93100 | cj011,LOC106577738 | non-coding | downstream | 441983 | 23320451 ~ 23321055 (+) |
| G93101 | NA | non-coding | downstream | 452022 | 23330490 ~ 23330720 (+) |
| G93102 | NA | non-coding | downstream | 452266 | 23330734 ~ 23330972 (+) |
| G93125 | NA | non-coding | downstream | 549264 | 23427732 ~ 23429155 (+) |
| G93131 | NA | non-coding | downstream | 562941 | 23441409 ~ 23441770 (+) |
| AMCG00017745 | NA | other | upstream | 2027461 | 20848356 ~ 20850617 (+) |
| AMCG00017747 | NA | other | upstream | 2056030 | 20799595 ~ 20822048 (+) |
| AMCG00017730 | ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 | other | upstream | 2874949 | 19993085 ~ 20003129 (+) |
| AMCG00017712 | NA | other | upstream | 3349785 | 19444172 ~ 19528293 (+) |
| AMCG00017710 | nans,LOC108241509,LOC103384124,LOC107390934,LOC107390917 | other | upstream | 3444975 | 19396028 ~ 19433103 (+) |
| AMCG00017783 | NA | other | downstream | 423147 | 23301615 ~ 23329569 (+) |
| AMCG00017817 | phox2b,LOC101065912,LOC106604546 | other | downstream | 1230092 | 24108560 ~ 24112110 (+) |
| AMCG00017829 | smim14,LOC107700293,LOC107757606 | other | downstream | 1826802 | 24705270 ~ 24715730 (+) |
| AMCG00017843 | NA | other | downstream | 2171841 | 25050309 ~ 25052374 (+) |
| AMCG00017886 | NA | other | downstream | 4114423 | 26992891 ~ 26997452 (+) |
