G93090


Basic Information

Item Value
gene id G93090
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23290332 ~ 23290681 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU116128
TTTCTTGATTCAAAAGGATCTTTAATTAAGGGGATACAGGTCTTATTTAATGGATATGCAATTCAATGAATATGTTGTTGATTAAAAAGGTCTTCTGTAATGCACACATCTAAGATTTGCTCTTCCTTCTCATTCTGTAGAGCCTCCTTTTACTGCTGTGTTTGGAGATGTGCAGATCAGGGTCACTCGTTCTCTTATTATGGACACTGCATTTACACAGACAGTTGGTCCGAGACAGGGATTCAGTCTTGGGAACTTTGCGCTGTGGGacgaaaagcaaaaaaaacacataaatataaagACAGGGTTATCAGTCATATGCATCTTTTAATTAAACGCTGTCACTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116128 True 350 lncRNA 0.38 1 23290332 23290681

Neighbor

gene id symbol gene type direction distance location
AMCG00017777 gtf2e2,LOC107671915,LOC107548363 coding downstream 11290 23264034 ~ 23279042 (-)
AMCG00017776 NA coding downstream 95788 23169573 ~ 23194544 (-)
AMCG00017763 NA coding downstream 924285 22309249 ~ 22366047 (-)
AMCG00017757 ptprd,LOC103370113 coding downstream 1887072 21399301 ~ 21403260 (-)
AMCG00017758 ptprd,LOC106577623 coding downstream 1920843 21316467 ~ 21369489 (-)
AMCG00017782 aco1 coding upstream 6007 23296688 ~ 23313459 (-)
AMCG00017781 acer2,LOC107691831,LOC107675399,LOC107601172,LOC107559953 coding upstream 40263 23330944 ~ 23345917 (-)
AMCG00017787 NA coding upstream 64925 23355606 ~ 23388495 (-)
AMCG00017789 NA coding upstream 120980 23411661 ~ 23422126 (-)
AMCG00017788 NA coding upstream 133010 23423691 ~ 23430213 (-)
G93038 NA non-coding downstream 450898 22839151 ~ 22839434 (-)
G93033 NA non-coding downstream 485948 22801371 ~ 22804384 (-)
G93028 NA non-coding downstream 512233 22777804 ~ 22778099 (-)
G93026 NA non-coding downstream 598800 22690675 ~ 22691532 (-)
G93024 NA non-coding downstream 600655 22686424 ~ 22689677 (-)
G93092 NA non-coding upstream 4138 23294819 ~ 23295369 (-)
G93159 NA non-coding upstream 5119 23295800 ~ 23296246 (-)
G93165 NA non-coding upstream 35844 23326525 ~ 23329744 (-)
G93173 NA non-coding upstream 153530 23444211 ~ 23540120 (-)
G93324 NA non-coding upstream 616894 23907575 ~ 23910679 (-)
AMCG00017725 NA other downstream 2931707 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 3870976 19412987 ~ 19419356 (-)
G92436 NA other downstream 4827156 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 5500583 17781648 ~ 17789749 (-)
AMCG00017665 NA other downstream 5802835 17468605 ~ 17487497 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other upstream 27412 23318093 ~ 23321954 (-)
AMCG00017819 NA other upstream 973998 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 1655414 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 1706863 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 2654460 25945141 ~ 25957648 (-)

Expression


Co-expression Network