G93125


Basic Information

Item Value
gene id G93125
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23427732 ~ 23429155 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU116170
CAAGCTCTTCCTCAGTCAGGGGGAGGTAGTGGTCCACCAGAGACTCGGATGTGCTCAGTGCCGAGTCCACTCCAGTGCTCACCATCTTCACCACACGGCTGCCCATCACTGTGTTCACACTGCCATTCACCATCGCTTTGGTCATTTCCATACTCTCCTGCACTGCCCCCCTGGTCTTGTCCACCACTCCAGTGATGGTGTAAGACACCGTGTCCTTGGCACCAGTCACAGTGATGGCCACTGCATCCTTGGCTCCAGTTACAACATCCTTAGCATTGGCGACAACCTGTCAGATGGCTGATGAAGGATTGGCAAAGTCTTCTCAATTTTATCCAGACCCTTACAAGCCAGGTCATTTGCTACTGTTTGAGGCTCCAGTTTGTTGATGATAGGCATGGCACTGGTAAGAGCAACAGAAGTAATGGTTTTCACACTCATCTCTGCCACTTCACACATAGACTTGATGTAGGGGTGATTCTCCTTAGTGTTACAATATACATTGGAGACCATGTCATAGGTAGAGCTAACCAGGGGCAGGTTAGCAACTCTAGCTACCACATTCTGCAGAGAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116170 True 574 lncRNA 0.50 3 23427732 23429155

Neighbor

gene id symbol gene type direction distance location
AMCG00017785 rps6,LOC106609995,LOC106602804 coding upstream 75454 23348358 ~ 23352278 (+)
AMCG00017786 NA coding upstream 131085 23295493 ~ 23296647 (+)
AMCG00017771 NA coding upstream 138377 23279749 ~ 23289355 (+)
AMCG00017770 NA coding upstream 151562 23271599 ~ 23276170 (+)
AMCG00017775 rbpms,LOC107377421,LOC106526281,LOC107086924 coding upstream 177885 23227857 ~ 23249847 (+)
AMCG00017784 NA coding downstream 10591 23439746 ~ 23443917 (+)
AMCG00017794 LOC103353869,LOC108275199,LOC100699015,LOC101470794 coding downstream 181083 23610238 ~ 23615963 (+)
AMCG00017793 NA coding downstream 198746 23627901 ~ 23632668 (+)
AMCG00017798 NA coding downstream 219053 23648208 ~ 23671667 (+)
AMCG00017803 abca1b coding downstream 284788 23713943 ~ 23748256 (+)
G93102 NA non-coding upstream 96760 23330734 ~ 23330972 (+)
G93101 NA non-coding upstream 97012 23330490 ~ 23330720 (+)
G93100 cj011,LOC106577738 non-coding upstream 106677 23320451 ~ 23321055 (+)
G93039 NA non-coding upstream 549264 22878078 ~ 22878468 (+)
G93027 NA non-coding upstream 649629 22777728 ~ 22778103 (+)
G93131 NA non-coding downstream 12254 23441409 ~ 23441770 (+)
G93207 LOC107571907,LOC107703852,LOC108427439 non-coding downstream 246095 23675250 ~ 23675551 (+)
G93208 NA non-coding downstream 247645 23676800 ~ 23677092 (+)
G93231 NA non-coding downstream 330585 23759740 ~ 23765482 (+)
G93236 NA non-coding downstream 380152 23809307 ~ 23809908 (+)
AMCG00017783 NA other upstream 98163 23301615 ~ 23329569 (+)
AMCG00017745 NA other upstream 2577115 20848356 ~ 20850617 (+)
AMCG00017747 NA other upstream 2605684 20799595 ~ 20822048 (+)
AMCG00017730 ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 other upstream 3424603 19993085 ~ 20003129 (+)
AMCG00017712 NA other upstream 3899439 19444172 ~ 19528293 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other downstream 679405 24108560 ~ 24112110 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other downstream 1276115 24705270 ~ 24715730 (+)
AMCG00017843 NA other downstream 1621154 25050309 ~ 25052374 (+)
AMCG00017886 NA other downstream 3563736 26992891 ~ 26997452 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other downstream 4043726 27472881 ~ 27697379 (+)

Expression


Co-expression Network