G93173


Basic Information

Item Value
gene id G93173
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23444211 ~ 23540120 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU116235
NtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatatatatatactgtacatttgtacAGTAAATCCTATTTAGTTAGCAGGTTTCATAGCCCACAATATAGATACAATgtatatagatgtatttttaacatgattTGAACATTGAACATGTCTATATTTCCTGCTAACATTGGTGaggtttttctgtttgtcttgaGGAAATGTTTGGTTGCATAATGATTCATTCCAGAGCAGTCAGGGTTTAGATATTACCAATATTTTGGCACACAATTCAGTTTTGCAATACACCCTTTTCATTTACACATGGGGAGTATTCCAAATACAAGCTTTGGTTTAGTACTGGGAAACCGTGGTGAAACAGGGTTTGCAGTTCAGAAGGTTTTTGATAGATTTATTGTGAGATTTAGCACCACGAATCGCATATGgtttacattcataaataattgaaattatttCTCCAACCATACAGGCACAAAAAATgccattcatttttatattaatctcCAAACTCGTATCGTAACAACCGCATCAACCTTACATAGAAGCTCAAAAGCTCATGTCAGTATGCGAGTATCGCATCTgtatcataataaaatatttttttaactaaattaacAAAGTCTGGTCAAGTGGTTTATTTCTACACACCCATGTATTTTGCTACGATTTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116235 True 690 lncRNA 0.33 2 23444211 23540120

Neighbor

gene id symbol gene type direction distance location
AMCG00017788 NA coding downstream 13998 23423691 ~ 23430213 (-)
AMCG00017789 NA coding downstream 22085 23411661 ~ 23422126 (-)
AMCG00017787 NA coding downstream 55716 23355606 ~ 23388495 (-)
AMCG00017781 acer2,LOC107691831,LOC107675399,LOC107601172,LOC107559953 coding downstream 98294 23330944 ~ 23345917 (-)
AMCG00017782 aco1 coding downstream 130752 23296688 ~ 23313459 (-)
AMCG00017795 dnaja1,LOC106591825,LOC108431796 coding upstream 77560 23617680 ~ 23627418 (-)
AMCG00017796 LOC105419749 coding upstream 93335 23633455 ~ 23646547 (-)
AMCG00017807 NA coding upstream 131524 23671644 ~ 23690436 (-)
AMCG00017805 NA coding upstream 210251 23750371 ~ 23760237 (-)
AMCG00017808 NA coding upstream 255793 23795913 ~ 23812448 (-)
G93165 NA non-coding downstream 114467 23326525 ~ 23329744 (-)
G93159 NA non-coding downstream 147965 23295800 ~ 23296246 (-)
G93092 NA non-coding downstream 148842 23294819 ~ 23295369 (-)
G93090 NA non-coding downstream 153530 23290332 ~ 23290681 (-)
G93038 NA non-coding downstream 604777 22839151 ~ 22839434 (-)
G93324 NA non-coding upstream 367455 23907575 ~ 23910679 (-)
G93350 NA non-coding upstream 494576 24034696 ~ 24037610 (-)
G93355 NA non-coding upstream 504074 24044194 ~ 24046369 (-)
G93399 NA non-coding upstream 761300 24301420 ~ 24301980 (-)
G93434 NA non-coding upstream 965262 24505382 ~ 24505610 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 122257 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 3085586 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 4024855 19412987 ~ 19419356 (-)
G92436 NA other downstream 4981035 18462784 ~ 18463176 (-)
AMCG00017675 NA other downstream 5654462 17781648 ~ 17789749 (-)
AMCG00017819 NA other upstream 724559 24264679 ~ 24270595 (-)
AMCG00017839 NA other upstream 1405975 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 1457424 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 2405021 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 2472368 26012488 ~ 26015942 (-)

Expression


Co-expression Network