G93207 (LOC107571907,LOC107703852,LOC108427439)


Basic Information

Item Value
gene id G93207
gene name LOC107571907,LOC107703852,LOC108427439
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23675250 ~ 23675551 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU116284
CCATAAGAGCCTTATCCATGTAATACTCTTTGCCGGGGCTTCCGTCATTGTATTTGGTATCGATGGCAAAACACAGGAACAAAACGTCCACCACGATTTCATATATGGAGAGGAAGCAATGGGCAaccaggaaagcaaagaggcaCACTATGATCAGGGGAAGGACCCACACAGTGTAATCCCGCTGGTAGTTCAGAGCCAGTACTCCCACAAAGGCTGTGCTGGACACGATCAAGATCtggaaacaaagacacaaacattgGTTCCTGTTGGAAACCTTTCTTCGCTCCGGCAAATCCAAC

Function

NR:

description
PREDICTED: choline transporter-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116284 True 302 lncRNA 0.48 1 23675250 23675551

Neighbor

gene id symbol gene type direction distance location
AMCG00017798 NA coding upstream 3583 23648208 ~ 23671667 (+)
AMCG00017793 NA coding upstream 42582 23627901 ~ 23632668 (+)
AMCG00017794 LOC103353869,LOC108275199,LOC100699015,LOC101470794 coding upstream 59287 23610238 ~ 23615963 (+)
AMCG00017784 NA coding upstream 231333 23439746 ~ 23443917 (+)
AMCG00017785 rps6,LOC106609995,LOC106602804 coding upstream 322972 23348358 ~ 23352278 (+)
AMCG00017803 abca1b coding downstream 38392 23713943 ~ 23748256 (+)
AMCG00017800 NA coding downstream 91820 23767371 ~ 23770666 (+)
AMCG00017801 NA coding downstream 106317 23781868 ~ 23793676 (+)
AMCG00017802 NA coding downstream 120248 23795799 ~ 23799246 (+)
AMCG00017797 NA coding downstream 169371 23844922 ~ 23857827 (+)
G93131 NA non-coding upstream 233480 23441409 ~ 23441770 (+)
G93125 NA non-coding upstream 246095 23427732 ~ 23429155 (+)
G93102 NA non-coding upstream 344278 23330734 ~ 23330972 (+)
G93101 NA non-coding upstream 344530 23330490 ~ 23330720 (+)
G93100 cj011,LOC106577738 non-coding upstream 354195 23320451 ~ 23321055 (+)
G93208 NA non-coding downstream 1249 23676800 ~ 23677092 (+)
G93231 NA non-coding downstream 84189 23759740 ~ 23765482 (+)
G93236 NA non-coding downstream 133756 23809307 ~ 23809908 (+)
G93237 NA non-coding downstream 134474 23810025 ~ 23812448 (+)
G93238 NA non-coding downstream 138295 23813846 ~ 23814421 (+)
AMCG00017783 NA other upstream 345681 23301615 ~ 23329569 (+)
AMCG00017745 NA other upstream 2824633 20848356 ~ 20850617 (+)
AMCG00017747 NA other upstream 2853202 20799595 ~ 20822048 (+)
AMCG00017730 ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 other upstream 3672121 19993085 ~ 20003129 (+)
AMCG00017712 NA other upstream 4146957 19444172 ~ 19528293 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other downstream 433009 24108560 ~ 24112110 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other downstream 1029719 24705270 ~ 24715730 (+)
AMCG00017843 NA other downstream 1374758 25050309 ~ 25052374 (+)
AMCG00017886 NA other downstream 3317340 26992891 ~ 26997452 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other downstream 3797330 27472881 ~ 27697379 (+)

Expression


Co-expression Network