G93208


Basic Information

Item Value
gene id G93208
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 23676800 ~ 23677092 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU116285
CGAAGCACTAATGGTTTGAATGCATCTCAGAATAAAACATGCTCATTCCCAGTGCTGTTTAGGATCTTTAAGAGCTATTTGTGACGGAATCCAGTGACTGctgtcaaataaacaatatgacaGCTAgtgaatgtaatttatattgGACGTACCTttccaagaaacaaaacaaaatctccaACAGTATTGATAGCCGCGACTCTCAATGCATTTTCCACCAGAATTACAAAGGCGTCTTTTGCCGAGGTGCAGAAATTGGTGCTATTGATGGCTGTAGCTGCATATGcattctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116285 True 293 lncRNA 0.40 1 23676800 23677092

Neighbor

gene id symbol gene type direction distance location
AMCG00017798 NA coding upstream 5133 23648208 ~ 23671667 (+)
AMCG00017793 NA coding upstream 44132 23627901 ~ 23632668 (+)
AMCG00017794 LOC103353869,LOC108275199,LOC100699015,LOC101470794 coding upstream 60837 23610238 ~ 23615963 (+)
AMCG00017784 NA coding upstream 232883 23439746 ~ 23443917 (+)
AMCG00017785 rps6,LOC106609995,LOC106602804 coding upstream 324522 23348358 ~ 23352278 (+)
AMCG00017803 abca1b coding downstream 36851 23713943 ~ 23748256 (+)
AMCG00017800 NA coding downstream 90279 23767371 ~ 23770666 (+)
AMCG00017801 NA coding downstream 104776 23781868 ~ 23793676 (+)
AMCG00017802 NA coding downstream 118707 23795799 ~ 23799246 (+)
AMCG00017797 NA coding downstream 167830 23844922 ~ 23857827 (+)
G93207 LOC107571907,LOC107703852,LOC108427439 non-coding upstream 1249 23675250 ~ 23675551 (+)
G93131 NA non-coding upstream 235030 23441409 ~ 23441770 (+)
G93125 NA non-coding upstream 247645 23427732 ~ 23429155 (+)
G93102 NA non-coding upstream 345828 23330734 ~ 23330972 (+)
G93101 NA non-coding upstream 346080 23330490 ~ 23330720 (+)
G93231 NA non-coding downstream 82648 23759740 ~ 23765482 (+)
G93236 NA non-coding downstream 132215 23809307 ~ 23809908 (+)
G93237 NA non-coding downstream 132933 23810025 ~ 23812448 (+)
G93238 NA non-coding downstream 136754 23813846 ~ 23814421 (+)
G93241 NA non-coding downstream 141239 23818331 ~ 23820523 (+)
AMCG00017783 NA other upstream 347231 23301615 ~ 23329569 (+)
AMCG00017745 NA other upstream 2826183 20848356 ~ 20850617 (+)
AMCG00017747 NA other upstream 2854752 20799595 ~ 20822048 (+)
AMCG00017730 ppp3ca,LOC107084148,LOC106922390,LOC106958666,LOC102788851 other upstream 3673671 19993085 ~ 20003129 (+)
AMCG00017712 NA other upstream 4148507 19444172 ~ 19528293 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other downstream 431468 24108560 ~ 24112110 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other downstream 1028178 24705270 ~ 24715730 (+)
AMCG00017843 NA other downstream 1373217 25050309 ~ 25052374 (+)
AMCG00017886 NA other downstream 3315799 26992891 ~ 26997452 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other downstream 3795789 27472881 ~ 27697379 (+)

Expression


Co-expression Network