G93576


Basic Information

Item Value
gene id G93576
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 24922467 ~ 24927188 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU116771
GTTAAAGGGGGAGTGTTTTCCTCTGGCAAGTCGTTTCACTTTGCTGTTTTTCGCGGGAAAAAAGGGACTGGAGGCGGAGTGATTTCACTGCTAACAGGCGGAAGTACGGCAGAGCGCCAAACAGGCAACTGAGTATTTAATAAAGCACACTGGGCTAAAGTACTGAGAGatcGGATTTGTAAAAAGAATGGAGAGACCTTGACAATTCCTGTTAACAGTACAGACCCCAACTTGGTATTGAAACTGAGGAAGCCTGGAACAGATCAAACGTTTGTTTATATGACAGTAGTTTATAACCAAGCAACCTCCCCTGCAGAGTACAAAGACAGATGTGAATTTAATGCATCTGCTTCAGAGTTTTTTGTGAAAAATTTGACCAACAATGATAGTGGCATCTATACAGTCTATAACGATCTTGGTGAAAAGCTGTGGTGTTCAGAAGTGGTCTTGGAAGAAATCAAGCTAGAACACAGGACATGCAACTGACTACTGACACAGGGAGAAGACCAAATGATGGAAAAGAAAGTGTTCTTGGATAATAAATGTGCCAGAGGGTGATCTTTCAAGCTCGACAGAGGAGTGCTTCTCCACACCTGAGACTGCCAGGATGAAGATAGATAATGCAGTTAGACAGCTCAACATGTAATTTATCTCCTGTGATGAAATGTTCTTTAGTGGCGCATTAAGGACTTCAGAGCAATGTTAGAGCAATGTATTGTTGTTGAATTCACACACCAGTTGACTTGGTAAGTGTGACGAGAGACTGACAGACCCCAAATGGTTTCTCTAGAACTAGATTAATTTAAACCAGTTACTGTATTAGGAATAACCATTTACCAAAATCTAAagcctaaaaaataaaaatgggctAACCAAAAGCCTACAGTCATTTAAAATCCATGAGGCTTGGGAGTATGAGGACATCTTGGACTACAACTCCCGCAGTAACTGTAGCATtaaataaaaggctgttttggaatgCATTGCCGCTGGTGGTTAGATGCAAGCCAATAGCCAACCAGATTAAGCTTTTTGTCAAGAGACGGGAACATTAAGTGTCCAAATGCAGGATGCCAACTTTGccactttatttatatattatatatatttatttatatgtatatttatttattctcgtTTATTGACTGCAGTggaatgaaaatgccttaaatAAACCAAGACGGC

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU116771 True 1185 lncRNA 0.40 4 24922467 24927188

Neighbor

gene id symbol gene type direction distance location
AMCG00017836 NA coding downstream 3641 24903782 ~ 24918826 (-)
AMCG00017840 klhl5,LOC107656383,LOC107565971,LOC108412945,LOC107746020 coding downstream 83320 24799083 ~ 24839147 (-)
AMCG00017838 wdr19,LOC107591558,LOC107750430 coding downstream 134126 24759381 ~ 24788341 (-)
AMCG00017832 NA coding downstream 182966 24732695 ~ 24739501 (-)
AMCG00017833 lias,LOC102787141 coding downstream 196775 24716450 ~ 24725692 (-)
AMCG00017837 ints10 coding upstream 983 24928171 ~ 24942633 (-)
AMCG00017845 NA coding upstream 38286 24965474 ~ 24986772 (-)
AMCG00017846 NA coding upstream 148417 25075605 ~ 25080431 (-)
AMCG00017851 NA coding upstream 168010 25095198 ~ 25100631 (-)
AMCG00017850 NA coding upstream 173645 25100833 ~ 25105142 (-)
G93509 rl9,rpl9,LOC107562595,LOC107700291 non-coding downstream 192245 24725938 ~ 24730222 (-)
G93500 NA non-coding downstream 242567 24677165 ~ 24679900 (-)
G93434 NA non-coding downstream 416857 24505382 ~ 24505610 (-)
G93399 NA non-coding downstream 620487 24301420 ~ 24301980 (-)
G93355 NA non-coding downstream 876098 24044194 ~ 24046369 (-)
G93591 NA non-coding upstream 22780 24949968 ~ 24950248 (-)
G93639 NA non-coding upstream 179614 25106802 ~ 25107082 (-)
G93641 NA non-coding upstream 183702 25110890 ~ 25111090 (-)
G93660 NA non-coding upstream 445745 25372933 ~ 25381038 (-)
G93689 NA non-coding upstream 590098 25517286 ~ 25517600 (-)
AMCG00017819 NA other downstream 651872 24264679 ~ 24270595 (-)
AMCG00017780 LOC101079287,LOC106577738,LOC100690429,LOC105925506,LOC108244244 other downstream 1600513 23318093 ~ 23321954 (-)
AMCG00017725 NA other downstream 4563842 20302000 ~ 20358625 (-)
G92591 nansa,LOC108416893,LOC108416857,LOC107723182 other downstream 5503111 19412987 ~ 19419356 (-)
G92436 NA other downstream 6459291 18462784 ~ 18463176 (-)
AMCG00017839 NA other upstream 18907 24946095 ~ 24949136 (-)
AMCG00017844 frmpd1b,frmpd1,LOC107750435,LOC107570223,LOC107655878 other upstream 70356 24997544 ~ 25018212 (-)
AMCG00017861 LOC103354863 other upstream 1017953 25945141 ~ 25957648 (-)
AMCG00017866 smim19,LOC107754471,LOC106604684,LOC106611785 other upstream 1085300 26012488 ~ 26015942 (-)
G93795 shisa3,LOC102786300 other upstream 1176838 26104026 ~ 26107805 (-)

Expression


Co-expression Network