G93675


Basic Information

Item Value
gene id G93675
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 25408517 ~ 25409609 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU116898
ACGCGCGGCGCGGCGAGGCGAGGCGGATCGCGGTTCCTGCTCGGGCTTGTGGGGGTTAAATCGGCGTCCAAACGCGACAGGACATCGCTAGTCAAGGACCCGGGGACAGTGTGTTAGCGGTCGGACCCTCCTGTGTGTGCGAGaggttactttttttttttttgaaagacCTCCCAAgcgttttttttcctctctttttttggCAAAGGGCTTTTGGAAGAACGCAACACGCACACGAACCAGAGTCAGACCTGCGCCGGTGGAAACGCGCACAAATAGAGCGGTCCGGCGCCAGgaaataaagggaaaacaaGGGCAACATCGTcgggagagagaaggaaaaaaaaaaaagtgacggGGAAGAAAGTTTTAGTCGGACGCGGTCCTGCTGTCTCCCAGGAAAGGGAGAGATTTGCTGCTGCGGACGGATCTGCTGTCTCAAGCCGAGGCGATGGACGAGTTTTCACGGAAGTAGACGCAgacgccctctctctctctctctctctctctctctctctctgtatttataatttatactgGAAGGGATGTTTTTGTCTGCTGGATTACTGTGTGAAAAAGGCGACAATTAAAACGGGAGATCAGGATACACCTCAAAAGGGACGCCGACCAGCTACCGTTTTTGAACGTGAGGGGAAAGAGCTCCGTGCGGGTCCCCGGCGCTGGGGTCGCGGCGGCAGGAAGGGCTTGTCTCGGTGTCCCTGGACGCTCCGCTCCGaggctttcaaaacaaaaggaaacgcATCAACTGGAGCAGCGAAAGCAACGAGGggtctttttttccttcttcccctTCATCTCTGATCAAAACTTAGGGCACTCCAATTGAGGAACAAACAACTATTTTGaacttgtatatttttattcgtttcacccccctccaccccccaacTCTCCAGAACTATCTTTGAAGTGCTCAACAGAAAGGACATGCCCATCGCTGCTGCTTCACAGCCGACACAGGACCCCTGCCTCTACACCCGGCTGCACCCCATTTCCGATTCCGTCCCCAAGCAGGGCCATGTCTGTGAGGACCGGGGGGTGCGACCGCAGGACCAGGCCCAGCTCGGGGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116898 True 1093 lncRNA 0.54 1 25408517 25409609

Neighbor

gene id symbol gene type direction distance location
AMCG00017853 NA coding upstream 109390 25273953 ~ 25299127 (+)
AMCG00017849 pax5 coding upstream 145768 25250194 ~ 25262749 (+)
AMCG00017847 NA coding upstream 295840 25108891 ~ 25112677 (+)
AMCG00017848 zbtb5,LOC101168920,LOC101469222,LOC102302739 coding upstream 315179 25082919 ~ 25093338 (+)
AMCG00017842 NA coding upstream 334568 25053194 ~ 25073949 (+)
AMCG00017854 LOC107746038 coding downstream 44835 25454444 ~ 25462515 (+)
AMCG00017857 LOC107656869,LOC107548317,LOC100696351,LOC108424164,LOC107709434 coding downstream 148276 25557885 ~ 25574707 (+)
AMCG00017856 LOC107709456,LOC101470744,LOC102789888 coding downstream 204273 25613882 ~ 25625670 (+)
AMCG00017858 LOC102212431,LOC106592107,LOC103354528,LOC100699752 coding downstream 232206 25641815 ~ 25665195 (+)
AMCG00017859 LOC107084522,LOC107548356,LOC106961693,LOC103132339 coding downstream 349899 25759508 ~ 25777438 (+)
G93651 NA non-coding upstream 96170 25309702 ~ 25312347 (+)
G93588 NA non-coding upstream 459249 24947991 ~ 24949268 (+)
G93454 NA non-coding upstream 780099 24626559 ~ 24628418 (+)
G93354 NA non-coding upstream 1360749 24044178 ~ 24047768 (+)
G93241 NA non-coding upstream 1587994 23818331 ~ 23820523 (+)
G93688 NA non-coding downstream 107692 25517301 ~ 25517637 (+)
G93733 NA non-coding downstream 540127 25949736 ~ 25950372 (+)
G93734 NA non-coding downstream 541545 25951154 ~ 25951398 (+)
G93735 NA non-coding downstream 542459 25952068 ~ 25952377 (+)
G93736 NA non-coding downstream 543895 25953504 ~ 25953740 (+)
AMCG00017843 NA other upstream 356143 25050309 ~ 25052374 (+)
AMCG00017829 smim14,LOC107700293,LOC107757606 other upstream 692787 24705270 ~ 24715730 (+)
AMCG00017817 phox2b,LOC101065912,LOC106604546 other upstream 1296407 24108560 ~ 24112110 (+)
AMCG00017783 NA other upstream 2078948 23301615 ~ 23329569 (+)
AMCG00017745 NA other upstream 4557900 20848356 ~ 20850617 (+)
AMCG00017886 NA other downstream 1583282 26992891 ~ 26997452 (+)
AMCG00017898 kcnip4,LOC103360335,LOC100711851,LOC102780455 other downstream 2063272 27472881 ~ 27697379 (+)
AMCG00017910 NA other downstream 3222283 28631892 ~ 28646750 (+)
G94275 NA other downstream 4023803 29433412 ~ 29450347 (+)
AMCG00017978 NA other downstream 5410260 30819869 ~ 30831867 (+)

Expression


Co-expression Network